RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 SETD7Q8WTS6 366 aaKnown RBP11.9□□□□□ -0.5
SPG7-216ENST00000567138 FOXJ1Q92949 421 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 BHMTQ93088 406 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 HPS3Q969F9 1004 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 CRELD1Q96HD1 420 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 XPO6Q96QU8 1125 aaKnown RBP11.9□□□□□ -0.5
SPG7-216ENST00000567138 BBS2Q9BXC9 721 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 MIR1-1HGQ9H1L0 117 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 SMYD3Q9H7B4 428 aa11.9□□□□□ -0.5
SPG7-216ENST00000567138 NXF1Q9UBU9 619 aaKnown RBP11.9□□□□□ -0.5
SPG7-216ENST00000567138 ATP8B3O60423 1300 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 MYLKQ15746 1914 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 A0A1B0GTW7 788 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 EIF4E1BA6NMX2 242 aaKnown RBP11.89□□□□□ -0.51
SPG7-216ENST00000567138 GOLGA8CPA6NN73 597 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 WASH3PC4AMC7 463 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 KLRC4O43908 158 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 CLSTN1O94985 981 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 NCAM1P13591 858 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 TNNI1P19237 187 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 CD6P30203 668 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 TUBP50607 506 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 SCARA5Q6ZMJ2 495 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 UNC13DQ70J99 1090 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 GLRX5Q86SX6 157 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 PARP9Q8IXQ6 854 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 ELOA2Q8IYF1 753 aaPredicted RBP11.89□□□□□ -0.51
SPG7-216ENST00000567138 ERCC4Q92889 916 aaPredicted RBP11.89□□□□□ -0.51
SPG7-216ENST00000567138 TOE1Q96GM8 510 aaKnown RBP11.89□□□□□ -0.51
SPG7-216ENST00000567138 CGRRF1Q99675 332 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 GPR174Q9BXC1 333 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 ZDHHC5Q9C0B5 715 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 GAREM1Q9H706 876 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 DMAP1Q9NPF5 467 aaPredicted RBP11.89□□□□□ -0.51
SPG7-216ENST00000567138 KRT82Q9NSB4 513 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 HOOK1Q9UJC3 728 aaKnown RBP11.89□□□□□ -0.51
SPG7-216ENST00000567138 FNDC3AQ9Y2H6 1198 aaKnown RBP11.89□□□□□ -0.51
SPG7-216ENST00000567138 PLXNA2O75051 1894 aa11.89□□□□□ -0.51
SPG7-216ENST00000567138 GREM1O60565 184 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 TLR5O60602 858 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 CILPO75339 1184 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 TBX18O95935 607 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 MBD3O95983 291 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 RPN1P04843 607 aaKnown RBP11.88□□□□□ -0.51
SPG7-216ENST00000567138 ATXN1LP0C7T5 689 aaKnown RBP11.88□□□□□ -0.51
SPG7-216ENST00000567138 ZDHHC11BP0C7U3 371 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 MATKP42679 507 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 DGKGP49619 791 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 CDH8P55286 799 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 MYL6P60660 151 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 BNC1Q01954 994 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 CAMK4Q16566 473 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 KMT5BQ4FZB7 885 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 DCAF12L1Q5VU92 463 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 SNX30Q5VWJ9 437 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 PAQR9Q6ZVX9 377 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 CACUL1Q86Y37 369 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 ELMO3Q96BJ8 720 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 CCDC127Q96BQ5 260 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 DUSP9Q99956 384 aaKnown RBP11.88□□□□□ -0.51
SPG7-216ENST00000567138 PRDM16Q9HAZ2 1276 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 KIAA1586Q9HCI6 787 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 SCUBE2Q9NQ36 999 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 TOR4AQ9NXH8 423 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 WSB2Q9NYS7 404 aaPredicted RBP11.88□□□□□ -0.51
SPG7-216ENST00000567138 PLK2Q9NYY3 685 aa11.88□□□□□ -0.51
SPG7-216ENST00000567138 FLNBO75369 2602 aaKnown RBP11.87□□□□□ -0.51
SPG7-216ENST00000567138 KCNJ18B7U540 433 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 MDM4O15151 490 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 EIF3DO15371 548 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPG7-216ENST00000567138 AP1G2O75843 785 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 CER1O95813 267 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 HOXD13P35453 343 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 CYP2J2P51589 502 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 CYP24A1Q07973 514 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 EHHADHQ08426 723 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 CYP4F3Q08477 520 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 ORC1Q13415 861 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 TRPC3Q13507 836 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 SNRNP35Q16560 246 aaKnown RBP11.87□□□□□ -0.51
SPG7-216ENST00000567138 FUT11Q495W5 492 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 HTR3DQ70Z44 454 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 TMPRSS7Q7RTY8 843 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 ZMIZ2Q8NF64 920 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 BAHD1Q8TBE0 780 aaPredicted RBP11.87□□□□□ -0.51
SPG7-216ENST00000567138 DNASE2BQ8WZ79 361 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 SMARCD1Q96GM5 515 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 KLF16Q9BXK1 252 aaPredicted RBP11.87□□□□□ -0.51
SPG7-216ENST00000567138 CLSTN2Q9H4D0 955 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 TM7SF3Q9NS93 570 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 IL37Q9NZH6 218 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 MARK1Q9P0L2 795 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 USP36Q9P275 1121 aaKnown RBP11.87□□□□□ -0.51
SPG7-216ENST00000567138 LSM7Q9UK45 103 aaKnown RBP11.87□□□□□ -0.51
SPG7-216ENST00000567138 PCDHA5Q9Y5H7 936 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 STON1Q9Y6Q2 735 aa11.87□□□□□ -0.51
SPG7-216ENST00000567138 FAM92AA1XBS5 289 aa11.86□□□□□ -0.51
SPG7-216ENST00000567138 FAM149AA5PLN7 773 aa11.86□□□□□ -0.51
SPG7-216ENST00000567138 GFRA2O00451 464 aa11.86□□□□□ -0.51
SPG7-216ENST00000567138 CLIC2O15247 247 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms