RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 NNTQ13423 1086 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 PUM1Q14671 1186 aaKnown RBP eCLIP17.47■□□□□ 0.39
CLN6-208ENST00000567060 ASTE1Q2TB18 679 aaPredicted RBP17.47■□□□□ 0.39
CLN6-208ENST00000567060 FAM78AQ5JUQ0 283 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 C10orf76Q5T2E6 689 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 OR6B2Q6IFH4 312 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 RSRC2Q7L4I2 434 aaKnown RBP17.47■□□□□ 0.39
CLN6-208ENST00000567060 XYLT1Q86Y38 959 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 TMTC1Q8IUR5 882 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 ARID3BQ8IVW6 561 aaPredicted RBP17.47■□□□□ 0.39
CLN6-208ENST00000567060 MCOLN2Q8IZK6 566 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 SUMF1Q8NBK3 374 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 C3orf20Q8ND61 904 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 FAM149B1Q96BN6 582 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.47■□□□□ 0.39
CLN6-208ENST00000567060 RPP25Q9BUL9 199 aaKnown RBP17.47■□□□□ 0.39
CLN6-208ENST00000567060 TRPC7Q9HCX4 862 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 ZFHX4Q86UP3 3567 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 CACNA1BQ00975 2339 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 FANCMQ8IYD8 2048 aa17.47■□□□□ 0.39
CLN6-208ENST00000567060 TPRP12270 2363 aaKnown RBP17.46■□□□□ 0.39
CLN6-208ENST00000567060 C2orf78A6NCI8 922 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 CAPN9O14815 690 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 COCHO43405 550 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 AKR1B10O60218 316 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 EIF4A3P38919 411 aaKnown RBP17.46■□□□□ 0.39
CLN6-208ENST00000567060 MTA1Q13330 715 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 HTR4Q13639 388 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 STXBP5Q5T5C0 1151 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 ALKBH5Q6P6C2 394 aaKnown RBP17.46■□□□□ 0.39
CLN6-208ENST00000567060 MMS22LQ6ZRQ5 1243 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 FAM183BPQ6ZVS7 135 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 ARL14EPQ8N8R7 260 aaPredicted RBP17.46■□□□□ 0.39
CLN6-208ENST00000567060 RUBCNQ92622 972 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 SLC2A13Q96QE2 648 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 C11orf70Q9BRQ4 267 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 NHEJ1Q9H9Q4 299 aaPredicted RBP17.46■□□□□ 0.39
CLN6-208ENST00000567060 ARHGEF3Q9NR81 526 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 SLC2A4RGQ9NR83 387 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 OSER1Q9NX31 292 aa17.46■□□□□ 0.39
CLN6-208ENST00000567060 HELZP42694 1942 aaKnown RBP17.45■□□□□ 0.38
CLN6-208ENST00000567060 DAB1O75553 588 aa17.45■□□□□ 0.38
CLN6-208ENST00000567060 PLEKP08567 350 aaPredicted RBP17.45■□□□□ 0.38
CLN6-208ENST00000567060 MBL2P11226 248 aaPredicted RBP17.45■□□□□ 0.38
CLN6-208ENST00000567060 C10orf120Q5SQS8 335 aa17.45■□□□□ 0.38
CLN6-208ENST00000567060 GPIHBP1Q8IV16 184 aa17.45■□□□□ 0.38
CLN6-208ENST00000567060 ZSWIM3Q96MP5 696 aa17.45■□□□□ 0.38
CLN6-208ENST00000567060 SERPINB11Q96P15 392 aa17.45■□□□□ 0.38
CLN6-208ENST00000567060 FOXQ1Q9C009 403 aa17.45■□□□□ 0.38
CLN6-208ENST00000567060 CCSER2Q9H7U1 834 aa17.45■□□□□ 0.38
CLN6-208ENST00000567060 LUC7LQ9NQ29 371 aaKnown RBP17.45■□□□□ 0.38
CLN6-208ENST00000567060 THG1LQ9NWX6 298 aaKnown RBP17.45■□□□□ 0.38
CLN6-208ENST00000567060 STAP1Q9ULZ2 295 aa17.45■□□□□ 0.38
CLN6-208ENST00000567060 NENFQ9UMX5 172 aa17.45■□□□□ 0.38
CLN6-208ENST00000567060 HBS1LQ9Y450 684 aaKnown RBP17.45■□□□□ 0.38
CLN6-208ENST00000567060 A0A087X0T9 212 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 ANKRD62A6NC57 917 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 PIK3R2O00459 728 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 NRG2O14511 850 aaPredicted RBP17.44■□□□□ 0.38
CLN6-208ENST00000567060 FTLP02792 175 aaPredicted RBP17.44■□□□□ 0.38
CLN6-208ENST00000567060 FAM228BP0C875 321 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 NCAM1P13591 858 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 DESP17661 470 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 FCARP24071 287 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 NOS2P35228 1153 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 CYLC1P35663 651 aaPredicted RBP17.44■□□□□ 0.38
CLN6-208ENST00000567060 MATKP42679 507 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 STARD6P59095 220 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 FCHO2Q0JRZ9 810 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 USP4Q13107 963 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 FAM102AQ5T9C2 384 aaPredicted RBP17.44■□□□□ 0.38
CLN6-208ENST00000567060 MFSD6LQ8IWD5 586 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 CCDC112Q8NEF3 446 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 PJA1Q8NG27 643 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 BPIFB1Q8TDL5 484 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 CLEC4CQ8WTT0 213 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 USP13Q92995 863 aaPredicted RBP17.44■□□□□ 0.38
CLN6-208ENST00000567060 DCLK3Q9C098 648 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 RNF38Q9H0F5 515 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 MRPL47Q9HD33 250 aaKnown RBP17.44■□□□□ 0.38
CLN6-208ENST00000567060 PARVAQ9NVD7 372 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 MARCH2Q9P0N8 246 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 TJP2Q9UDY2 1190 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 INTUQ9ULD6 942 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 ZNF510Q9Y2H8 683 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 NUMBLQ9Y6R0 609 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 SCINQ9Y6U3 715 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 SPTBN2O15020 2390 aa17.44■□□□□ 0.38
CLN6-208ENST00000567060 KMT2BQ9UMN6 2715 aaPredicted RBP17.43■□□□□ 0.38
CLN6-208ENST00000567060 E2F8A0AVK6 867 aa17.43■□□□□ 0.38
CLN6-208ENST00000567060 SIGLEC16A6NMB1 481 aa17.43■□□□□ 0.38
CLN6-208ENST00000567060 SLC9A3R1O14745 358 aaPredicted RBP17.43■□□□□ 0.38
CLN6-208ENST00000567060 NRDCO43847 1150 aa17.43■□□□□ 0.38
CLN6-208ENST00000567060 KRT3P12035 628 aa17.43■□□□□ 0.38
CLN6-208ENST00000567060 PSMC3P17980 439 aa17.43■□□□□ 0.38
CLN6-208ENST00000567060 GBP1P32455 592 aa17.43■□□□□ 0.38
CLN6-208ENST00000567060 PGFP49763 221 aa17.43■□□□□ 0.38
CLN6-208ENST00000567060 GPC5P78333 572 aa17.43■□□□□ 0.38
CLN6-208ENST00000567060 RING1Q06587 406 aa17.43■□□□□ 0.38
CLN6-208ENST00000567060 ARHGAP29Q52LW3 1261 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms