RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 BHLHA9Q7RTU4 235 aa15.92■□□□□ 0.14
CMTM3-212ENST00000566121 SFTPA1Q8IWL2 248 aa15.92■□□□□ 0.14
CMTM3-212ENST00000566121 LMO3Q8TAP4 145 aa15.92■□□□□ 0.14
CMTM3-212ENST00000566121 PLD4Q96BZ4 506 aa15.92■□□□□ 0.14
CMTM3-212ENST00000566121 EEF2KMTQ96G04 330 aa15.92■□□□□ 0.14
CMTM3-212ENST00000566121 SPACA7Q96KW9 195 aa15.92■□□□□ 0.14
CMTM3-212ENST00000566121 ARID3AQ99856 593 aa15.92■□□□□ 0.14
CMTM3-212ENST00000566121 MMRN2Q9H8L6 949 aa15.92■□□□□ 0.14
CMTM3-212ENST00000566121 CNGB3Q9NQW8 809 aa15.92■□□□□ 0.14
CMTM3-212ENST00000566121 STRIP2Q9ULQ0 834 aa15.92■□□□□ 0.14
CMTM3-212ENST00000566121 CIZ1Q9ULV3 898 aaPredicted RBP15.92■□□□□ 0.14
CMTM3-212ENST00000566121 HBS1LQ9Y450 684 aaKnown RBP15.92■□□□□ 0.14
CMTM3-212ENST00000566121 PPP1R3GB7ZBB8 358 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 O00370 1275 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 TIMM44O43615 452 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 ZNF217O75362 1048 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 MORC3Q14149 939 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 SF3A2Q15428 464 aaKnown RBP15.91■□□□□ 0.14
CMTM3-212ENST00000566121 C10orf76Q5T2E6 689 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 FYB2Q5VWT5 728 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 SDE2Q6IQ49 451 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 LPCAT2Q7L5N7 544 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 NAT16Q8N8M0 369 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 SLC35F5Q8WV83 523 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 IRGQQ8WZA9 623 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 AZIN2Q96A70 460 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 HSFY1Q96LI6 401 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 DNAJC17Q9NVM6 304 aaKnown RBP15.91■□□□□ 0.14
CMTM3-212ENST00000566121 MARCH2Q9P0N8 246 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 HESX1Q9UBX0 185 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 TSPAN16Q9UKR8 245 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 CNTN6Q9UQ52 1028 aa15.91■□□□□ 0.14
CMTM3-212ENST00000566121 KMT2BQ9UMN6 2715 aaPredicted RBP15.91■□□□□ 0.14
CMTM3-212ENST00000566121 CACNA1BQ00975 2339 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 ANTXRLA6NF34 631 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 PRRT4C9JH25 899 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 NEDD8-MDP1E9PL57 170 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 SCAMP3O14828 347 aaKnown RBP15.9■□□□□ 0.14
CMTM3-212ENST00000566121 IRF1P10914 325 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 PRKCSHP14314 528 aaPredicted RBP15.9■□□□□ 0.14
CMTM3-212ENST00000566121 BMP6P22004 513 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 RPL34P49207 117 aaKnown RBP15.9■□□□□ 0.14
CMTM3-212ENST00000566121 DGKGP49619 791 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 TKTL1P51854 596 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 YWHAGP61981 247 aaKnown RBP eCLIP15.9■□□□□ 0.14
CMTM3-212ENST00000566121 CREB5Q02930 508 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 KDSRQ06136 332 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 EIF4HQ15056 248 aaKnown RBP15.9■□□□□ 0.14
CMTM3-212ENST00000566121 DCAF17Q5H9S7 520 aaPredicted RBP15.9■□□□□ 0.14
CMTM3-212ENST00000566121 RNF43Q68DV7 783 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 BEND5Q7L4P6 421 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 RABEPKQ7Z6M1 372 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 TRIM59Q8IWR1 403 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 TRIML1Q8N9V2 468 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 PIWIL1Q96J94 861 aaKnown RBP15.9■□□□□ 0.14
CMTM3-212ENST00000566121 ABCC13Q9NSE7 274 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 MAN1B1Q9UKM7 699 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 AGO1Q9UL18 857 aaKnown RBP15.9■□□□□ 0.14
CMTM3-212ENST00000566121 NFE2L3Q9Y4A8 694 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 NUP205Q92621 2012 aa15.9■□□□□ 0.14
CMTM3-212ENST00000566121 CACNA1EQ15878 2313 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 UPK3BL1B0FP48 263 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 UPK3BL2E5RIL1 263 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 KHNYNO15037 678 aaKnown RBP15.89■□□□□ 0.13
CMTM3-212ENST00000566121 ZBTB24O43167 697 aaPredicted RBP15.89■□□□□ 0.13
CMTM3-212ENST00000566121 CD44P16070 742 aaKnown RBP15.89■□□□□ 0.13
CMTM3-212ENST00000566121 GBP1P32455 592 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 PPM1JQ5JR12 505 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 MPP7Q5T2T1 576 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 MSANTD2Q6P1R3 559 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 SLC23A3Q6PIS1 610 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 SYT12Q8IV01 421 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 RBBP8NLQ8NC74 664 aaPredicted RBP15.89■□□□□ 0.13
CMTM3-212ENST00000566121 EHBP1Q8NDI1 1231 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 CEP76Q8TAP6 659 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 FAM81BQ96LP2 452 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 NT5C1BQ96P26 610 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 TPSD1Q9BZJ3 242 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 LRRC4Q9HBW1 653 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 RXFP3Q9NSD7 469 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 THAP10Q9P2Z0 257 aaPredicted RBP15.89■□□□□ 0.13
CMTM3-212ENST00000566121 MBD1Q9UIS9 605 aaPredicted RBP15.89■□□□□ 0.13
CMTM3-212ENST00000566121 THADAQ6YHU6 1953 aa15.89■□□□□ 0.13
CMTM3-212ENST00000566121 PI4KAP42356 2102 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 TCRBV21S2A2A0A5A6 115 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 TRIM49BA6NDI0 452 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 MDM4O15151 490 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 TRIM24O15164 1050 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 AP5Z1O43299 807 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 HOXB2P14652 356 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 GABRG2P18507 467 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 BCKDHBP21953 392 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 CORO1AP31146 461 aaKnown RBP15.88■□□□□ 0.13
CMTM3-212ENST00000566121 MFAP3P55082 362 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 SHC2P98077 582 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 EFEMP1Q12805 493 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 LMAN2Q12907 356 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 DAB2IPQ5VWQ8 1189 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 BSPRYQ5W0U4 402 aa15.88■□□□□ 0.13
CMTM3-212ENST00000566121 TPGS1Q6ZTW0 290 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms