RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 PDE4DIPQ5VU43 2346 aa31.81■■■□□ 2.68
CTCF-203ENST00000566078 C3orf70A6NLC5 250 aaPredicted RBP31.81■■■□□ 2.68
CTCF-203ENST00000566078 CDH6P55285 790 aa31.81■■■□□ 2.68
CTCF-203ENST00000566078 COPS2P61201 443 aa31.81■■■□□ 2.68
CTCF-203ENST00000566078 ZC3H12AQ5D1E8 599 aaKnown RBP31.81■■■□□ 2.68
CTCF-203ENST00000566078 MSANTD2Q6P1R3 559 aa31.81■■■□□ 2.68
CTCF-203ENST00000566078 PSMG2Q969U7 264 aa31.81■■■□□ 2.68
CTCF-203ENST00000566078 MYRFLQ96LU7 910 aa31.81■■■□□ 2.68
CTCF-203ENST00000566078 ZNF512Q96ME7 567 aaPredicted RBP31.81■■■□□ 2.68
CTCF-203ENST00000566078 HERPUD2Q9BSE4 406 aa31.81■■■□□ 2.68
CTCF-203ENST00000566078 SLC28A3Q9HAS3 691 aa31.81■■■□□ 2.68
CTCF-203ENST00000566078 RBM12Q9NTZ6 932 aaKnown RBP31.81■■■□□ 2.68
CTCF-203ENST00000566078 SFMBT1Q9UHJ3 866 aa31.81■■■□□ 2.68
CTCF-203ENST00000566078 AP4E1Q9UPM8 1137 aa31.81■■■□□ 2.68
CTCF-203ENST00000566078 KRIT1O00522 736 aa31.8■■■□□ 2.68
CTCF-203ENST00000566078 IRAK2O43187 625 aa31.8■■■□□ 2.68
CTCF-203ENST00000566078 LRG1P02750 347 aa31.8■■■□□ 2.68
CTCF-203ENST00000566078 CD48P09326 243 aa31.8■■■□□ 2.68
CTCF-203ENST00000566078 ITIH3Q06033 890 aa31.8■■■□□ 2.68
CTCF-203ENST00000566078 KRT81Q14533 505 aa31.8■■■□□ 2.68
CTCF-203ENST00000566078 DNAJB7Q7Z6W7 309 aaPredicted RBP31.8■■■□□ 2.68
CTCF-203ENST00000566078 ITIH5Q86UX2 942 aa31.8■■■□□ 2.68
CTCF-203ENST00000566078 HEMGNQ9BXL5 484 aa31.8■■■□□ 2.68
CTCF-203ENST00000566078 FZD10Q9ULW2 581 aa31.8■■■□□ 2.68
CTCF-203ENST00000566078 EFCAB8A8MWE9 144 aa31.79■■■□□ 2.68
CTCF-203ENST00000566078 PTPN7P35236 360 aa31.79■■■□□ 2.68
CTCF-203ENST00000566078 CDKN2BP42772 138 aa31.79■■■□□ 2.68
CTCF-203ENST00000566078 CA9Q16790 459 aa31.79■■■□□ 2.68
CTCF-203ENST00000566078 TFDP3Q5H9I0 405 aa31.79■■■□□ 2.68
CTCF-203ENST00000566078 GDPD5Q8WTR4 605 aa31.79■■■□□ 2.68
CTCF-203ENST00000566078 OLA1Q9NTK5 396 aaKnown RBP31.79■■■□□ 2.68
CTCF-203ENST00000566078 hCG_1818297A0A087WSY0 165 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 TCRBV7S2A1N4TA0A589 114 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 MSI1O43347 362 aaKnown RBP31.78■■■□□ 2.68
CTCF-203ENST00000566078 CLASP2O75122 1294 aaKnown RBP31.78■■■□□ 2.68
CTCF-203ENST00000566078 CXCR3P49682 368 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 ARSEP51690 589 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 TEX35Q5T0J7 233 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 NOA1Q8NC60 698 aaKnown RBP31.78■■■□□ 2.68
CTCF-203ENST00000566078 SERPINB11Q96P15 392 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 CALN1Q9BXU9 219 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 DHX35Q9H5Z1 703 aaKnown RBP31.78■■■□□ 2.68
CTCF-203ENST00000566078 NOL12Q9UGY1 213 aaKnown RBP eCLIP31.78■■■□□ 2.68
CTCF-203ENST00000566078 V9GYY5 206 aaPredicted RBP31.78■■■□□ 2.68
CTCF-203ENST00000566078 KRT10P13645 584 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 EFEMP1Q12805 493 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 PPP2R5EQ16537 467 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 KAZNQ674X7 775 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 RNF34Q969K3 372 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 PCDH18Q9HCL0 1135 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 TMPRSS4Q9NRS4 437 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 UXTQ9UBK9 157 aaPredicted RBP31.78■■■□□ 2.68
CTCF-203ENST00000566078 ASB3Q9Y575 518 aa31.78■■■□□ 2.68
CTCF-203ENST00000566078 LAMA3Q16787 3333 aa31.77■■■□□ 2.68
CTCF-203ENST00000566078 GOLGA6L10A0A0M3HER8 536 aa31.77■■■□□ 2.68
CTCF-203ENST00000566078 DPYSL3Q14195 570 aa31.77■■■□□ 2.68
CTCF-203ENST00000566078 PDK2Q15119 407 aa31.77■■■□□ 2.68
CTCF-203ENST00000566078 C10orf120Q5SQS8 335 aa31.77■■■□□ 2.68
CTCF-203ENST00000566078 NTAN1Q96AB6 310 aa31.77■■■□□ 2.68
CTCF-203ENST00000566078 WDCPQ9H6R7 721 aa31.77■■■□□ 2.68
CTCF-203ENST00000566078 CCSER2Q9H7U1 834 aa31.77■■■□□ 2.68
CTCF-203ENST00000566078 MAN1C1Q9NR34 630 aa31.77■■■□□ 2.68
CTCF-203ENST00000566078 TRPM5Q9NZQ8 1165 aa31.77■■■□□ 2.68
CTCF-203ENST00000566078 DOCK6Q96HP0 2047 aa31.77■■■□□ 2.68
CTCF-203ENST00000566078 TLR5O60602 858 aa31.76■■■□□ 2.67
CTCF-203ENST00000566078 AIF1P55008 147 aa31.76■■■□□ 2.67
CTCF-203ENST00000566078 EIF4EBP2Q13542 120 aaPredicted RBP31.76■■■□□ 2.67
CTCF-203ENST00000566078 DPYSL2Q16555 572 aa31.76■■■□□ 2.67
CTCF-203ENST00000566078 TAZQ16635 292 aa31.76■■■□□ 2.67
CTCF-203ENST00000566078 PPP6R3Q5H9R7 873 aaPredicted RBP31.76■■■□□ 2.67
CTCF-203ENST00000566078 EFHC2Q5JST6 749 aa31.76■■■□□ 2.67
CTCF-203ENST00000566078 PSTKQ8IV42 348 aaKnown RBP31.76■■■□□ 2.67
CTCF-203ENST00000566078 MAP7D3Q8IWC1 876 aa31.76■■■□□ 2.67
CTCF-203ENST00000566078 KCTD15Q96SI1 283 aaPredicted RBP31.76■■■□□ 2.67
CTCF-203ENST00000566078 LMAN2LQ9H0V9 348 aa31.76■■■□□ 2.67
CTCF-203ENST00000566078 ZNF334Q9HCZ1 680 aaPredicted RBP31.76■■■□□ 2.67
CTCF-203ENST00000566078 NR2E1Q9Y466 385 aa31.76■■■□□ 2.67
CTCF-203ENST00000566078 ZNF840PA6NDX5 716 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 TBX18O95935 607 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 ARL13BQ3SXY8 428 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 PPM1LQ5SGD2 360 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 SNX30Q5VWJ9 437 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 ELMOD1Q8N336 334 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 MAIP1Q8WWC4 291 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 MAGEB5Q9BZ81 275 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 ANLNQ9NQW6 1124 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 RASAL2Q9UJF2 1139 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 EPOPA6NHQ4 379 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 CCDC188H7C350 402 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 EPCAMP16422 314 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 L1CAMP32004 1257 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 ADRA1BP35368 520 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 SCAPQ12770 1279 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 MMRN1Q13201 1228 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 KLF1Q13351 362 aaPredicted RBP31.75■■■□□ 2.67
CTCF-203ENST00000566078 ZDHHC14Q8IZN3 488 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 FAM71BQ8TC56 605 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 CDK5RAP1Q96SZ6 601 aaKnown RBP31.75■■■□□ 2.67
CTCF-203ENST00000566078 TKTL2Q9H0I9 626 aa31.75■■■□□ 2.67
CTCF-203ENST00000566078 PER2O15055 1255 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms