RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 RPL34P49207 117 aaKnown RBP10.39□□□□□ -0.75
CDH1-206ENST00000564676 SNX16P57768 344 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 NHLH1Q02575 133 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 CSTF1Q05048 431 aaKnown RBP10.39□□□□□ -0.75
CDH1-206ENST00000564676 CCINQ13939 588 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 IQCB1Q15051 598 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 ZSCAN23Q3MJ62 389 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 NAIF1Q69YI7 327 aaPredicted RBP10.39□□□□□ -0.75
CDH1-206ENST00000564676 TPGS1Q6ZTW0 290 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 APTXQ7Z2E3 356 aaKnown RBP10.39□□□□□ -0.75
CDH1-206ENST00000564676 TMEM110Q86TL2 294 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 SYNPOQ8N3V7 929 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 C1orf131Q8NDD1 294 aaKnown RBP10.39□□□□□ -0.75
CDH1-206ENST00000564676 PLD4Q96BZ4 506 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 PPP1R13BQ96KQ4 1090 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 ERGIC2Q96RQ1 377 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 SYNCQ9H7C4 482 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 CBX8Q9HC52 389 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 FBRSL1Q9HCM7 1045 aaKnown RBP10.39□□□□□ -0.75
CDH1-206ENST00000564676 SPHK2Q9NRA0 654 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 FAM86C1Q9NVL1 165 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 CYTH4Q9UIA0 394 aa10.39□□□□□ -0.75
CDH1-206ENST00000564676 HBS1LQ9Y450 684 aaKnown RBP10.39□□□□□ -0.75
CDH1-206ENST00000564676 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.38□□□□□ -0.75
CDH1-206ENST00000564676 GOLGA6L19H0YKK7 550 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 EPHB6O15197 1021 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 PAPSS1O43252 624 aaPredicted RBP10.38□□□□□ -0.75
CDH1-206ENST00000564676 CAVIN2O95810 425 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 SERPINC1P01008 464 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 KLKB1P03952 638 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 APODP05090 189 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 CHKAP35790 457 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 PLA2G5P39877 138 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 OPRD1P41143 372 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 STAT1P42224 750 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 CXCL12P48061 93 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 SLC6A11P48066 632 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 HARS2P49590 506 aaKnown RBP10.38□□□□□ -0.75
CDH1-206ENST00000564676 CCR3P51677 355 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 GAS6Q14393 721 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 PPP2R5DQ14738 602 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 GAB4Q2WGN9 574 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 FBXO43Q4G163 708 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 OR6B2Q6IFH4 312 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 MSANTD2Q6P1R3 559 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 Q6ZNB5 142 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 Q6ZS52 159 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 CACNA2D4Q7Z3S7 1137 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 TMEM25Q86YD3 366 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 DENND1CQ8IV53 801 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 SPEM1Q8N4L4 309 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 WDTC1Q8N5D0 677 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 NAT16Q8N8M0 369 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 TMEM35BQ8NCS4 154 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 CCDC26Q8TAB7 109 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 IPO4Q8TEX9 1081 aaKnown RBP10.38□□□□□ -0.75
CDH1-206ENST00000564676 CPXM1Q96SM3 734 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 PNKPQ96T60 521 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 TRIM62Q9BVG3 475 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 BBS2Q9BXC9 721 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 WDR35Q9P2L0 1181 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 FBXO4Q9UKT5 387 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 NAALADL1Q9UQQ1 740 aa10.38□□□□□ -0.75
CDH1-206ENST00000564676 MYO18AQ92614 2054 aaKnown RBP10.37□□□□□ -0.75
CDH1-206ENST00000564676 NEDD8-MDP1E9PL57 170 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 TEX33O43247 280 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 HOXC11O43248 304 aaPredicted RBP10.37□□□□□ -0.75
CDH1-206ENST00000564676 MSI1O43347 362 aaKnown RBP10.37□□□□□ -0.75
CDH1-206ENST00000564676 ATG13O75143 517 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 RNF40O75150 1001 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 KAT7O95251 611 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 MMEP08473 750 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 SP9P0CG40 484 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 TYRP14679 529 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 EIF2DP41214 584 aaKnown RBP10.37□□□□□ -0.75
CDH1-206ENST00000564676 JAM2P57087 298 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 KDSRQ06136 332 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 TRIP4Q15650 581 aaPredicted RBP10.37□□□□□ -0.75
CDH1-206ENST00000564676 PREPLQ4J6C6 727 aaPredicted RBP10.37□□□□□ -0.75
CDH1-206ENST00000564676 TSSK4Q6SA08 328 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 NOP9Q86U38 636 aaKnown RBP10.37□□□□□ -0.75
CDH1-206ENST00000564676 LUZP1Q86V48 1076 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 C12orf40Q86WS4 652 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 MAML2Q8IZL2 1156 aaPredicted RBP10.37□□□□□ -0.75
CDH1-206ENST00000564676 DQX1Q8TE96 717 aaKnown RBP10.37□□□□□ -0.75
CDH1-206ENST00000564676 BHMTQ93088 406 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 XPO6Q96QU8 1125 aaKnown RBP10.37□□□□□ -0.75
CDH1-206ENST00000564676 POPDC2Q9HBU9 364 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 RTN4Q9NQC3 1192 aaKnown RBP10.37□□□□□ -0.75
CDH1-206ENST00000564676 ARHGEF4Q9NR80 690 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 DEC1Q9P2X7 70 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 TJP2Q9UDY2 1190 aa10.37□□□□□ -0.75
CDH1-206ENST00000564676 AGO1Q9UL18 857 aaKnown RBP10.37□□□□□ -0.75
CDH1-206ENST00000564676 FAM170AA1A519 330 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 TBC1D3BA6NDS4 549 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 TULP3O75386 442 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 ERBB2P04626 1255 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 CYBBP04839 570 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 FYNP06241 537 aa10.36□□□□□ -0.75
CDH1-206ENST00000564676 CDH5P33151 784 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms