RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 ACDQ96AP0 544 aa14.29□□□□□ -0.12
CNOT1-206ENST00000564557 PLD4Q96BZ4 506 aa14.29□□□□□ -0.12
CNOT1-206ENST00000564557 SYNCQ9H7C4 482 aa14.29□□□□□ -0.12
CNOT1-206ENST00000564557 ACP6Q9NPH0 428 aa14.29□□□□□ -0.12
CNOT1-206ENST00000564557 PRMT8Q9NR22 394 aaPredicted RBP14.29□□□□□ -0.12
CNOT1-206ENST00000564557 ARHGEF4Q9NR80 690 aa14.29□□□□□ -0.12
CNOT1-206ENST00000564557 SFMBT1Q9UHJ3 866 aa14.29□□□□□ -0.12
CNOT1-206ENST00000564557 HBS1LQ9Y450 684 aaKnown RBP14.29□□□□□ -0.12
CNOT1-206ENST00000564557 PCDHGA2Q9Y5H1 932 aa14.29□□□□□ -0.12
CNOT1-206ENST00000564557 TBC1D3BA6NDS4 549 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 PROB1E7EW31 1015 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 HOXC11O43248 304 aaPredicted RBP14.28□□□□□ -0.12
CNOT1-206ENST00000564557 GFRA3O60609 400 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 KAT7O95251 611 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 NCAM1P13591 858 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 UCHL3P15374 230 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 GRIA2P42262 883 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 SLC6A11P48066 632 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 SEC13P55735 322 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 UBXN1Q04323 297 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 KDSRQ06136 332 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 GAS6Q14393 721 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 KLHL40Q2TBA0 621 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 NAIF1Q69YI7 327 aaPredicted RBP14.28□□□□□ -0.12
CNOT1-206ENST00000564557 DENND1CQ8IV53 801 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 PASD1Q8IV76 773 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 RPLP0P6Q8NHW5 317 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 SPAG5Q96R06 1193 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 STK33Q9BYT3 514 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 PLCB1Q9NQ66 1216 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 DNAJC17Q9NVM6 304 aaKnown RBP14.28□□□□□ -0.12
CNOT1-206ENST00000564557 PCDHGC3Q9UN70 934 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 FHOD1Q9Y613 1164 aa14.28□□□□□ -0.12
CNOT1-206ENST00000564557 CACNA1HO95180 2353 aa14.27□□□□□ -0.12
CNOT1-206ENST00000564557 CHURC1-FNTBB4DL54 471 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 LMNAP02545 664 aaKnown RBP14.27□□□□□ -0.13
CNOT1-206ENST00000564557 TYRP14679 529 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 TPM4P67936 248 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 PDCLQ13371 301 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 FILIP1LQ4L180 1135 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 C2orf27AQ580R0 203 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 HEATR6Q6AI08 1181 aaKnown RBP14.27□□□□□ -0.13
CNOT1-206ENST00000564557 GRAMD4Q6IC98 578 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 SLC47A2Q86VL8 602 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 UNC45BQ8IWX7 931 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 FAM71AQ8IYT1 594 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 NEK11Q8NG66 645 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 IPO4Q8TEX9 1081 aaKnown RBP14.27□□□□□ -0.13
CNOT1-206ENST00000564557 CLEC4CQ8WTT0 213 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 BHMTQ93088 406 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 PPP1R13BQ96KQ4 1090 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 SLC4A5Q9BY07 1137 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 LHX5Q9H2C1 402 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 FAM207AQ9NSI2 230 aaPredicted RBP14.27□□□□□ -0.13
CNOT1-206ENST00000564557 RYDENQ9NUL5 291 aaKnown RBP14.27□□□□□ -0.13
CNOT1-206ENST00000564557 LIMA1Q9UHB6 759 aaKnown RBP14.27□□□□□ -0.13
CNOT1-206ENST00000564557 RAB23Q9ULC3 237 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 DAAM1Q9Y4D1 1078 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 ATG2BQ96BY7 2078 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 MYOFQ9NZM1 2061 aa14.27□□□□□ -0.13
CNOT1-206ENST00000564557 E5RJQ4 531 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 GREM1O60565 184 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 TULP3O75386 442 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 PAPSS2O95340 614 aaPredicted RBP14.26□□□□□ -0.13
CNOT1-206ENST00000564557 PNMA6AP0CW24 399 aaPredicted RBP14.26□□□□□ -0.13
CNOT1-206ENST00000564557 CLCN1P35523 988 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 TNFRSF4P43489 277 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 ZNF165P49910 485 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 TBX4P57082 545 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 POLR2FP61218 127 aaKnown RBP14.26□□□□□ -0.13
CNOT1-206ENST00000564557 MRPS21P82921 87 aaKnown RBP14.26□□□□□ -0.13
CNOT1-206ENST00000564557 NUGGCQ68CJ6 796 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 OR6B2Q6IFH4 312 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 Q6ZNB5 142 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 BHLHA9Q7RTU4 235 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 TMEM110Q86TL2 294 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 C12orf40Q86WS4 652 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 TMEM35BQ8NCS4 154 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 MSANTD4Q8NCY6 345 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 DDI1Q8WTU0 396 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 SERPINB11Q96P15 392 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 HINFPQ9BQA5 517 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 BPIFA3Q9BQP9 254 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 MARK1Q9P0L2 795 aa14.26□□□□□ -0.13
CNOT1-206ENST00000564557 AJAP1Q9UKB5 411 aaPredicted RBP14.26□□□□□ -0.13
CNOT1-206ENST00000564557 AGO1Q9UL18 857 aaKnown RBP14.26□□□□□ -0.13
CNOT1-206ENST00000564557 SYCE3A1L190 88 aa14.25□□□□□ -0.13
CNOT1-206ENST00000564557 LGALS16A8MUM7 142 aa14.25□□□□□ -0.13
CNOT1-206ENST00000564557 K7EQS6 105 aa14.25□□□□□ -0.13
CNOT1-206ENST00000564557 MSI1O43347 362 aaKnown RBP14.25□□□□□ -0.13
CNOT1-206ENST00000564557 KLKB1P03952 638 aa14.25□□□□□ -0.13
CNOT1-206ENST00000564557 CYP11B1P15538 503 aa14.25□□□□□ -0.13
CNOT1-206ENST00000564557 RPL34P49207 117 aaKnown RBP14.25□□□□□ -0.13
CNOT1-206ENST00000564557 SLC11A2P49281 568 aa14.25□□□□□ -0.13
CNOT1-206ENST00000564557 FNTBP49356 437 aa14.25□□□□□ -0.13
CNOT1-206ENST00000564557 DGKGP49619 791 aa14.25□□□□□ -0.13
CNOT1-206ENST00000564557 ZNF445P59923 1031 aa14.25□□□□□ -0.13
CNOT1-206ENST00000564557 YWHAZP63104 245 aaKnown RBP14.25□□□□□ -0.13
CNOT1-206ENST00000564557 SYCP1Q15431 976 aa14.25□□□□□ -0.13
CNOT1-206ENST00000564557 TRIP4Q15650 581 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms