RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 BHMTQ93088 406 aa16.54■□□□□ 0.24
CLK3-211ENST00000563297 ERLEC1Q96DZ1 483 aa16.54■□□□□ 0.24
CLK3-211ENST00000563297 ARID3AQ99856 593 aa16.54■□□□□ 0.24
CLK3-211ENST00000563297 GABRG3Q99928 467 aa16.54■□□□□ 0.24
CLK3-211ENST00000563297 ZNF510Q9Y2H8 683 aa16.54■□□□□ 0.24
CLK3-211ENST00000563297 ADAMTS9Q9P2N4 1935 aa16.53■□□□□ 0.24
CLK3-211ENST00000563297 IGHV1OR15-9A0A0B4J2B8 117 aa16.53■□□□□ 0.24
CLK3-211ENST00000563297 WASH3PC4AMC7 463 aa16.53■□□□□ 0.24
CLK3-211ENST00000563297 STX10O60499 249 aa16.53■□□□□ 0.24
CLK3-211ENST00000563297 EPB41P11171 864 aaKnown RBP16.53■□□□□ 0.24
CLK3-211ENST00000563297 CEACAM1P13688 526 aa16.53■□□□□ 0.24
CLK3-211ENST00000563297 NDUFV2P19404 249 aa16.53■□□□□ 0.24
CLK3-211ENST00000563297 CSRP1P21291 193 aaKnown RBP16.53■□□□□ 0.24
CLK3-211ENST00000563297 RPL6Q02878 288 aaKnown RBP16.53■□□□□ 0.24
CLK3-211ENST00000563297 EFEMP1Q12805 493 aa16.53■□□□□ 0.24
CLK3-211ENST00000563297 PNOCQ13519 176 aa16.53■□□□□ 0.24
CLK3-211ENST00000563297 UAP1L1Q3KQV9 507 aa16.53■□□□□ 0.24
CLK3-211ENST00000563297 PEAR1Q5VY43 1037 aaPredicted RBP16.53■□□□□ 0.24
CLK3-211ENST00000563297 ARHGAP17Q68EM7 881 aa16.53■□□□□ 0.24
CLK3-211ENST00000563297 PIGZQ86VD9 579 aa16.53■□□□□ 0.24
CLK3-211ENST00000563297 ANKRD52Q8NB46 1076 aa16.53■□□□□ 0.24
CLK3-211ENST00000563297 CDK5RAP1Q96SZ6 601 aaKnown RBP16.53■□□□□ 0.24
CLK3-211ENST00000563297 FAM124BQ9H5Z6 455 aaPredicted RBP16.53■□□□□ 0.24
CLK3-211ENST00000563297 CACNA2D2Q9NY47 1150 aa16.53■□□□□ 0.24
CLK3-211ENST00000563297 RASAL2Q9UJF2 1139 aa16.53■□□□□ 0.24
CLK3-211ENST00000563297 CACNA1EQ15878 2313 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 GFRA2O00451 464 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 ZBTB24O43167 697 aaPredicted RBP16.52■□□□□ 0.24
CLK3-211ENST00000563297 ZNF217O75362 1048 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 PENKP01210 267 aaPredicted RBP16.52■□□□□ 0.24
CLK3-211ENST00000563297 HMBSP08397 361 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 ENGP17813 658 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 CHKAP35790 457 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 DPP6P42658 865 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 ZNF33AQ06730 810 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 CBWD6Q4V339 395 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 CBWD3Q5JTY5 395 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 CBWD5Q5RIA9 395 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 FYB2Q5VWT5 728 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 PM20D1Q6GTS8 502 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 CCDC34Q96HJ3 373 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 DCLK3Q9C098 648 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 AGO1Q9UL18 857 aaKnown RBP16.52■□□□□ 0.24
CLK3-211ENST00000563297 SLC27A6Q9Y2P4 619 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 COQ4Q9Y3A0 265 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 RAD54BQ9Y620 910 aa16.52■□□□□ 0.24
CLK3-211ENST00000563297 USP24Q9UPU5 2620 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 ATXN2Q99700 1313 aaKnown RBP16.51■□□□□ 0.23
CLK3-211ENST00000563297 CORO1AP31146 461 aaKnown RBP16.51■□□□□ 0.23
CLK3-211ENST00000563297 HOXD12P35452 270 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 MAPK8P45983 427 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 TKTL1P51854 596 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 YWHAGP61981 247 aaKnown RBP eCLIP16.51■□□□□ 0.23
CLK3-211ENST00000563297 ZNF252P-AS1Q0IIN9 211 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 DUOXA1Q1HG43 343 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 ANKRD40Q6AI12 368 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 SLC41A1Q8IVJ1 513 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 FMR1NBQ8N0W7 255 aaPredicted RBP16.51■□□□□ 0.23
CLK3-211ENST00000563297 ARHGAP18Q8N392 663 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 CEP76Q8TAP6 659 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 NDRG1Q92597 394 aaKnown RBP16.51■□□□□ 0.23
CLK3-211ENST00000563297 MRGPRX1Q96LB2 322 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 SLC6A17Q9H1V8 727 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 CD93Q9NPY3 652 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 MARCH2Q9P0N8 246 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 SLC6A14Q9UN76 642 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 CYP8B1Q9UNU6 501 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 STON1Q9Y6Q2 735 aa16.51■□□□□ 0.23
CLK3-211ENST00000563297 CEP295Q9C0D2 2601 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 SLC12A8A0AV02 714 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 TULP2O00295 520 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 ZBED1O96006 694 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 CFIP05156 583 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 SERPINF2P08697 491 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 PMS1P54277 932 aaKnown RBP16.5■□□□□ 0.23
CLK3-211ENST00000563297 MFAP3P55082 362 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 FKBP3Q00688 224 aaKnown RBP16.5■□□□□ 0.23
CLK3-211ENST00000563297 PDE4CQ08493 712 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 GEN1Q17RS7 908 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 COBLL1Q53SF7 1204 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 ZNF658Q5TYW1 1059 aaPredicted RBP16.5■□□□□ 0.23
CLK3-211ENST00000563297 TCERG1LQ5VWI1 586 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 DENND1CQ8IV53 801 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 ZC3H3Q8IXZ2 948 aaKnown RBP16.5■□□□□ 0.23
CLK3-211ENST00000563297 DEFB124Q8NES8 71 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 ZNF419Q96HQ0 510 aaPredicted RBP16.5■□□□□ 0.23
CLK3-211ENST00000563297 PIWIL1Q96J94 861 aaKnown RBP16.5■□□□□ 0.23
CLK3-211ENST00000563297 GSDMAQ96QA5 445 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 CAPN10Q9HC96 672 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 FSCN3Q9NQT6 498 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 RMND1Q9NWS8 449 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 THAP10Q9P2Z0 257 aaPredicted RBP16.5■□□□□ 0.23
CLK3-211ENST00000563297 WASF3Q9UPY6 502 aa16.5■□□□□ 0.23
CLK3-211ENST00000563297 SLC8A3P57103 927 aa16.49■□□□□ 0.23
CLK3-211ENST00000563297 CUL2Q13617 745 aa16.49■□□□□ 0.23
CLK3-211ENST00000563297 ENPP2Q13822 863 aa16.49■□□□□ 0.23
CLK3-211ENST00000563297 DCAF17Q5H9S7 520 aaPredicted RBP16.49■□□□□ 0.23
CLK3-211ENST00000563297 RSRC2Q7L4I2 434 aaKnown RBP16.49■□□□□ 0.23
CLK3-211ENST00000563297 BHLHA9Q7RTU4 235 aa16.49■□□□□ 0.23
CLK3-211ENST00000563297 CPXM2Q8N436 756 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms