RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 C12orf40Q86WS4 652 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 ZNF677Q86XU0 584 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 TMEM25Q86YD3 366 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 CPA6Q8N4T0 437 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 DTWD2Q8NBA8 298 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 TMEM35BQ8NCS4 154 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 RNF214Q8ND24 703 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 DQX1Q8TE96 717 aaKnown RBP8.93□□□□□ -0.98
UBR1-204ENST00000563239 CPA5Q8WXQ8 436 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 COL26A1Q96A83 441 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 OTUB2Q96DC9 234 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 SLC2A13Q96QE2 648 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 SPAG5Q96R06 1193 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 NELL2Q99435 816 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 OLA1Q9NTK5 396 aaKnown RBP8.93□□□□□ -0.98
UBR1-204ENST00000563239 RBM12Q9NTZ6 932 aaKnown RBP8.93□□□□□ -0.98
UBR1-204ENST00000563239 IFNKQ9P0W0 207 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 TBC1D14Q9P2M4 693 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 AGO1Q9UL18 857 aaKnown RBP8.93□□□□□ -0.98
UBR1-204ENST00000563239 MYO6Q9UM54 1294 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 NDRG2Q9UN36 371 aaKnown RBP8.93□□□□□ -0.98
UBR1-204ENST00000563239 SH3BP1Q9Y3L3 701 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 VPS13AQ96RL7 3174 aa8.93□□□□□ -0.98
UBR1-204ENST00000563239 WDR87Q6ZQQ6 2873 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 ANTXRLA6NF34 631 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 LRRC53A6NM62 1247 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 AP5Z1O43299 807 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 GALR2O43603 387 aaPredicted RBP8.92□□□□□ -0.98
UBR1-204ENST00000563239 NFATC1O95644 943 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 IGLV3-25P01717 112 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 GLI1P08151 1106 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 UNGP13051 313 aaPredicted RBP8.92□□□□□ -0.98
UBR1-204ENST00000563239 NCAM1P13591 858 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 CORO1AP31146 461 aaKnown RBP8.92□□□□□ -0.98
UBR1-204ENST00000563239 RPS9P46781 194 aaKnown RBP8.92□□□□□ -0.98
UBR1-204ENST00000563239 YWHAZP63104 245 aaKnown RBP8.92□□□□□ -0.98
UBR1-204ENST00000563239 TPM4P67936 248 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 SLC6A3Q01959 620 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 ARID5AQ03989 594 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 TCF15Q12870 199 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 PTP4A2Q12974 167 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 OTUD1Q5VV17 481 aaPredicted RBP8.92□□□□□ -0.98
UBR1-204ENST00000563239 NAA35Q5VZE5 725 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 TRNP1Q6NT89 227 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 C1orf228Q6PIY5 440 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 CACNA2D4Q7Z3S7 1137 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 TAC4Q86UU9 113 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 XYLT1Q86Y38 959 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 DENND1CQ8IV53 801 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 SFTPA1Q8IWL2 248 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 ETFBKMTQ8IXQ9 262 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 FAM217AQ8IXS0 508 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 MAML2Q8IZL2 1156 aaPredicted RBP8.92□□□□□ -0.98
UBR1-204ENST00000563239 DEFB106AQ8N104 65 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 PHTF2Q8N3S3 785 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 ZNF397Q8NF99 534 aaPredicted RBP8.92□□□□□ -0.98
UBR1-204ENST00000563239 RNF139Q8WU17 664 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 PLD4Q96BZ4 506 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 SLC39A13Q96H72 371 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 FCRL2Q96LA5 508 aaPredicted RBP8.92□□□□□ -0.98
UBR1-204ENST00000563239 AGPAT1Q99943 283 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 ADAM33Q9BZ11 813 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 EDEM3Q9BZQ6 932 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 XPO4Q9C0E2 1151 aaKnown RBP8.92□□□□□ -0.98
UBR1-204ENST00000563239 LMAN1LQ9HAT1 526 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 SPHK2Q9NRA0 654 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 ASNSD1Q9NWL6 643 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 AIPL1Q9NZN9 384 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 STRIP2Q9ULQ0 834 aa8.92□□□□□ -0.98
UBR1-204ENST00000563239 MRPS17Q9Y2R5 130 aaKnown RBP8.92□□□□□ -0.98
UBR1-204ENST00000563239 HBS1LQ9Y450 684 aaKnown RBP8.92□□□□□ -0.98
UBR1-204ENST00000563239 TRIM24O15164 1050 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 HOXC11O43248 304 aaPredicted RBP8.91□□□□□ -0.98
UBR1-204ENST00000563239 SART1O43290 800 aaKnown RBP8.91□□□□□ -0.98
UBR1-204ENST00000563239 GRAP2O75791 330 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 EGFP01133 1207 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 ADH5P11766 374 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 FERP16591 822 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 MMP8P22894 467 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 NUBP1P53384 320 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 RING1Q06587 406 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 GOLGA8FQ08AF8 430 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 GOLGA8DPQ0D2H9 430 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 MTAPQ13126 283 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 NR1H3Q13133 447 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 CLEC16AQ2KHT3 1053 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 EFHC1Q5JVL4 640 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 OR6B2Q6IFH4 312 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 PKN3Q6P5Z2 889 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 Q6ZS52 159 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 SLC26A9Q7LBE3 791 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 ERICH1Q86X53 443 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 GAS2L3Q86XJ1 694 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 SLC30A5Q8TAD4 765 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 ADAM32Q8TC27 787 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 FAM149B1Q96BN6 582 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 C18orf8Q96DM3 657 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 NOX5Q96PH1 765 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 P2RY13Q9BPV8 354 aa8.91□□□□□ -0.98
UBR1-204ENST00000563239 DCLK3Q9C098 648 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms