RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 HACD1B0YJ81 288 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 CAPN9O14815 690 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 CAPN15O75808 1086 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 ECM2O94769 699 aaPredicted RBP13.54□□□□□ -0.24
USB1-207ENST00000563149 NPTXRO95502 500 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 SERPINA6P08185 405 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 CSH1P0DML2 217 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 CSH2P0DML3 217 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 CYP2F1P24903 491 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 FDFT1P37268 417 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 IRX1P78414 480 aaPredicted RBP13.54□□□□□ -0.24
USB1-207ENST00000563149 GRIK3Q13003 919 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 STX3Q13277 289 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 TRMT5Q32P41 509 aaKnown RBP13.54□□□□□ -0.24
USB1-207ENST00000563149 RAB6CQ53S08 254 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 STEAP4Q687X5 459 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 MARK2Q7KZI7 788 aaKnown RBP13.54□□□□□ -0.24
USB1-207ENST00000563149 ALYREFQ86V81 257 aaKnown RBP13.54□□□□□ -0.24
USB1-207ENST00000563149 ARID3BQ8IVW6 561 aaPredicted RBP13.54□□□□□ -0.24
USB1-207ENST00000563149 HACE1Q8IYU2 909 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 NDUFAF2Q8N183 169 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 LINC01465Q8N7H1 131 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 STKLD1Q8NE28 680 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 SLC35F5Q8WV83 523 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 KHSRPQ92945 711 aaKnown RBP eCLIP13.54□□□□□ -0.24
USB1-207ENST00000563149 FAM136AQ96C01 138 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 PIWIL1Q96J94 861 aaKnown RBP13.54□□□□□ -0.24
USB1-207ENST00000563149 ZNF668Q96K58 619 aaPredicted RBP13.54□□□□□ -0.24
USB1-207ENST00000563149 FGD4Q96M96 766 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 ACAP3Q96P50 834 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 CCDC106Q9BWC9 280 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 RAB6CQ9H0N0 254 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 GGA3Q9NZ52 723 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 MOCS1Q9NZB8 636 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 PPARGC1AQ9UBK2 798 aaKnown RBP13.54□□□□□ -0.24
USB1-207ENST00000563149 HESX1Q9UBX0 185 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 DERAQ9Y315 318 aa13.54□□□□□ -0.24
USB1-207ENST00000563149 COL1A2P08123 1366 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 DNAJC25-GNG10A0A024R161 153 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 A0A087WZ62 844 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 A6NJR5 290 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 CNMDO75829 334 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 CIB2O75838 187 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 KRT36O76013 467 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 TM7SF2O76062 418 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 ALDH1A2O94788 518 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 CYP2C8P10632 490 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 VGLL4Q14135 290 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 TTLL4Q14679 1199 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 HSF5Q4G112 596 aaPredicted RBP13.53□□□□□ -0.24
USB1-207ENST00000563149 PPP1R26Q5T8A7 1209 aaPredicted RBP13.53□□□□□ -0.24
USB1-207ENST00000563149 FAXCQ5TGI0 409 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 ZNF534Q76KX8 674 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 DPH6Q7L8W6 267 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 TTC7BQ86TV6 843 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 WDR75Q8IWA0 830 aaKnown RBP13.53□□□□□ -0.24
USB1-207ENST00000563149 SCUBE1Q8IWY4 988 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 TRPM4Q8TD43 1214 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 DEPDC1BQ8WUY9 529 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 SCG3Q8WXD2 468 aaKnown RBP13.53□□□□□ -0.24
USB1-207ENST00000563149 CENPIQ92674 756 aaPredicted RBP13.53□□□□□ -0.24
USB1-207ENST00000563149 QKIQ96PU8 341 aaKnown RBP eCLIP13.53□□□□□ -0.24
USB1-207ENST00000563149 FDXACB1Q9BRP7 624 aaPredicted RBP13.53□□□□□ -0.24
USB1-207ENST00000563149 MECRQ9BV79 373 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 SLC13A1Q9BZW2 595 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 GPATCH2LQ9NWQ4 482 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 MORF4L1Q9UBU8 362 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 GLRA3O75311 464 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 TBX10O75333 385 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 GRAP2O75791 330 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 METTL18O95568 372 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 LINGO3P0C6S8 592 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 TXNP10599 105 aaKnown RBP13.53□□□□□ -0.24
USB1-207ENST00000563149 ARF4P18085 180 aaPredicted RBP13.53□□□□□ -0.24
USB1-207ENST00000563149 CDC25CP30307 473 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 L1CAMP32004 1257 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 GCLCP48506 637 aaPredicted RBP13.53□□□□□ -0.24
USB1-207ENST00000563149 HDAC4P56524 1084 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 CA9Q16790 459 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 SYCP2LQ5T4T6 812 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 ARHGAP17Q68EM7 881 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 PMF1Q6P1K2 205 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 GADL1Q6ZQY3 521 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 UNC93AQ86WB7 457 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 WDR60Q8WVS4 1066 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 CDKL2Q92772 493 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 C11orf84Q9BUA3 381 aaPredicted RBP13.53□□□□□ -0.24
USB1-207ENST00000563149 GPAMQ9HCL2 828 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 PLA2G4CQ9UP65 541 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 HBS1LQ9Y450 684 aaKnown RBP13.53□□□□□ -0.24
USB1-207ENST00000563149 MAD1L1Q9Y6D9 718 aa13.53□□□□□ -0.24
USB1-207ENST00000563149 HMX2A2RU54 273 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 C2orf71A6NGG8 1288 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 PIK3R2O00459 728 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 MAP3K7O43318 606 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 PEX10O60683 326 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 ZNF189O75820 626 aaPredicted RBP13.52□□□□□ -0.25
USB1-207ENST00000563149 ENO1P06733 434 aaKnown RBP13.52□□□□□ -0.25
USB1-207ENST00000563149 INSRRP14616 1297 aa13.52□□□□□ -0.25
USB1-207ENST00000563149 GRM5P41594 1212 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms