RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 JOSD2Q8TAC2 188 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 PLD4Q96BZ4 506 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 KXD1Q9BQD3 176 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 KLF16Q9BXK1 252 aaPredicted RBP19.63■□□□□ 0.73
RAB40C-207ENST00000563109 PACSIN1Q9BY11 444 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 IGSF9Q9P2J2 1179 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 LSM7Q9UK45 103 aaKnown RBP19.63■□□□□ 0.73
RAB40C-207ENST00000563109 CCL26Q9Y258 94 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 NUMBLQ9Y6R0 609 aa19.63■□□□□ 0.73
RAB40C-207ENST00000563109 TCF20Q9UGU0 1960 aaKnown RBP19.63■□□□□ 0.73
RAB40C-207ENST00000563109 SPTBN5Q9NRC6 3674 aaKnown RBP19.62■□□□□ 0.73
RAB40C-207ENST00000563109 C2CD4BA6NLJ0 364 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 HEPACAM2A8MVW5 462 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 ANHXE9PGG2 379 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 ZNF263O14978 683 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 MSI1O43347 362 aaKnown RBP19.62■□□□□ 0.73
RAB40C-207ENST00000563109 TRUB2O95900 331 aaKnown RBP19.62■□□□□ 0.73
RAB40C-207ENST00000563109 CYP1A2P05177 515 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 HMBSP08397 361 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 PDGFRAP16234 1089 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 KRT83P78385 493 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 TRIP4Q15650 581 aaPredicted RBP19.62■□□□□ 0.73
RAB40C-207ENST00000563109 SLC25A52Q3SY17 297 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 PPP1R15BQ5SWA1 713 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 TANGO2Q6ICL3 276 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 SND1Q7KZF4 910 aaKnown RBP eCLIP19.62■□□□□ 0.73
RAB40C-207ENST00000563109 ADAM32Q8TC27 787 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 BPIFB1Q8TDL5 484 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 DEPDC1BQ8WUY9 529 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 RXFP2Q8WXD0 754 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 FGF14Q92915 247 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 ZFRQ96KR1 1074 aaKnown RBP19.62■□□□□ 0.73
RAB40C-207ENST00000563109 DDX23Q9BUQ8 820 aaKnown RBP19.62■□□□□ 0.73
RAB40C-207ENST00000563109 NUP85Q9BW27 656 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 TMEM51Q9NW97 253 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 DDIT4Q9NX09 232 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 CFAP97Q9P2B7 532 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 LIMD1Q9UGP4 676 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 PCDHA13Q9Y5I0 950 aa19.62■□□□□ 0.73
RAB40C-207ENST00000563109 SYNJ2BP-COX16A0A087WUM0 186 aa19.61■□□□□ 0.73
RAB40C-207ENST00000563109 M0QYT0 321 aa19.61■□□□□ 0.73
RAB40C-207ENST00000563109 IRAK2O43187 625 aa19.61■□□□□ 0.73
RAB40C-207ENST00000563109 RFC1P35251 1148 aaPredicted RBP19.61■□□□□ 0.73
RAB40C-207ENST00000563109 TBX4P57082 545 aa19.61■□□□□ 0.73
RAB40C-207ENST00000563109 ZNF77Q15935 545 aa19.61■□□□□ 0.73
RAB40C-207ENST00000563109 CC2D1AQ6P1N0 951 aaPredicted RBP19.61■□□□□ 0.73
RAB40C-207ENST00000563109 KIAA1328Q86T90 577 aa19.61■□□□□ 0.73
RAB40C-207ENST00000563109 ARHGEF26Q96DR7 871 aa19.61■□□□□ 0.73
RAB40C-207ENST00000563109 CFAP57Q96MR6 1250 aa19.61■□□□□ 0.73
RAB40C-207ENST00000563109 NPY6RQ99463 290 aa19.61■□□□□ 0.73
RAB40C-207ENST00000563109 GKN1Q9NS71 199 aa19.61■□□□□ 0.73
RAB40C-207ENST00000563109 THG1LQ9NWX6 298 aaKnown RBP19.61■□□□□ 0.73
RAB40C-207ENST00000563109 COX16Q9P0S2 106 aa19.61■□□□□ 0.73
RAB40C-207ENST00000563109 CTTNBP2NLQ9P2B4 639 aa19.61■□□□□ 0.73
RAB40C-207ENST00000563109 UVRAGQ9P2Y5 699 aa19.61■□□□□ 0.73
RAB40C-207ENST00000563109 TLR6Q9Y2C9 796 aa19.61■□□□□ 0.73
RAB40C-207ENST00000563109 KIF26AQ9ULI4 1882 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-207ENST00000563109 F9P00740 461 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 IGLV3-25P01717 112 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 PTPN9P43378 593 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 HARS2P49590 506 aaKnown RBP19.6■□□□□ 0.73
RAB40C-207ENST00000563109 ZNF143P52747 638 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-207ENST00000563109 RPL7AP62424 266 aaKnown RBP19.6■□□□□ 0.73
RAB40C-207ENST00000563109 DEUP1Q05D60 604 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 NME3Q13232 169 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 NUGGCQ68CJ6 796 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 TRNP1Q6NT89 227 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 VITQ6UXI7 678 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 RHOT2Q8IXI1 618 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 ACRBPQ8NEB7 543 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 ST13P5Q8NFI4 369 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-207ENST00000563109 ZNF564Q8TBZ8 553 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-207ENST00000563109 RNF34Q969K3 372 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 TBCBQ99426 244 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 DCLK3Q9C098 648 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 KCNK12Q9HB15 430 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 PAXBP1Q9Y5B6 917 aa19.6■□□□□ 0.73
RAB40C-207ENST00000563109 E2F8A0AVK6 867 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 TMEM191CA6NGB0 347 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 C19orf67A6NJJ6 358 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 STC2O76061 302 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 APOEP02649 317 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 SLC2A3P11169 496 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 PSMC3P17980 439 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 PSMA2P25787 234 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 RDXP35241 583 aaKnown RBP19.59■□□□□ 0.73
RAB40C-207ENST00000563109 PITX1P78337 314 aaPredicted RBP19.59■□□□□ 0.73
RAB40C-207ENST00000563109 CCZ1BP86790 482 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 CCZ1P86791 482 aaPredicted RBP19.59■□□□□ 0.73
RAB40C-207ENST00000563109 ATP11AP98196 1134 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 RING1Q06587 406 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 CDO1Q16878 200 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 MFSD6LQ8IWD5 586 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 UNC45BQ8IWX7 931 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 KIAA1958Q8N8K9 716 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 FNIP1Q8TF40 1166 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 RFFLQ8WZ73 363 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 NT5C3BQ969T7 300 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 RSPRY1Q96DX4 576 aa19.59■□□□□ 0.73
RAB40C-207ENST00000563109 PGAP3Q96FM1 320 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms