RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 DNMT3BQ9UBC3 853 aaKnown RBP3.74□□□□□ -1.81
HDGFL3-202ENST00000562702 MID2Q9UJV3 735 aa3.74□□□□□ -1.81
HDGFL3-202ENST00000562702 CORO2BQ9UQ03 480 aa3.74□□□□□ -1.81
HDGFL3-202ENST00000562702 FAM50BQ9Y247 325 aa3.74□□□□□ -1.81
HDGFL3-202ENST00000562702 SNX14Q9Y5W7 946 aa3.74□□□□□ -1.81
HDGFL3-202ENST00000562702 SERINC4A6NH21 518 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 AP4M1O00189 453 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 CD3EAPO15446 510 aaKnown RBP3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 THAP12O43422 761 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 IL18RAPO95256 599 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 SYF2O95926 243 aaKnown RBP3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 MT-CO3P00414 261 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 KRT18P05783 430 aaKnown RBP3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 ANXA2P07355 339 aaKnown RBP3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 PARP1P09874 1014 aaKnown RBP3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 CTSAP10619 480 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 E2F1Q01094 437 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 DAG1Q14118 895 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 PTCHD3Q3KNS1 767 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 SLC9C1Q4G0N8 1177 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 RNASE12Q5GAN4 147 aaKnown RBP3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 CCDC181Q5TID7 509 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 CAPRIN2Q6IMN6 1127 aaKnown RBP3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 MZT2AQ6P582 158 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 RNF44Q7L0R7 432 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 C11orf96Q7Z7L8 435 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 LIX1LQ8IVB5 337 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 IQCDQ96DY2 449 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 C17orf80Q9BSJ5 609 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 USP22Q9UPT9 525 aa3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 DRG1Q9Y295 367 aaKnown RBP3.73□□□□□ -1.81
HDGFL3-202ENST00000562702 TRIP12Q14669 1992 aaPredicted RBP3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 IGLV5-39A0A0G2JS06 123 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 F8W8V4 182 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 M0R3H8 397 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 PMM2O15305 246 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 IGKV3-20P01619 116 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 NBPF7P0C2Y1 421 aaPredicted RBP3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 UQCRC1P31930 480 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 PGDP52209 483 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 ITGA8P53708 1063 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 LY6KQ17RY6 165 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 ZNF750Q32MQ0 723 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 MANEAQ5SRI9 462 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 CCSAPQ6IQ19 270 aaPredicted RBP3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 VSTM1Q6UX27 236 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 KSR2Q6VAB6 950 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 KCTD20Q7Z5Y7 419 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 PELI3Q8N2H9 469 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 PJA1Q8NG27 643 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 PNISRQ8TF01 805 aaKnown RBP3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 FAM84BQ96KN1 310 aaPredicted RBP3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 VN1R3Q9BXE9 311 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 TRIM36Q9NQ86 728 aa3.72□□□□□ -1.81
HDGFL3-202ENST00000562702 ANO9A1A5B4 782 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 POM121BA6NF01 834 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 CES2O00748 559 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 APAF1O14727 1248 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 ACOT8O14734 319 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 KPNA5O15131 536 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 VNN1O95497 513 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 FGAP02671 866 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 MYL1P05976 194 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 NGFRP08138 427 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 SLC5A1P13866 664 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 BTF3P20290 206 aaKnown RBP3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 PIK3CBP42338 1070 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 CASP5P51878 434 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 TBX4P57082 545 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 HSF1Q00613 529 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 TIAL1Q01085 375 aaKnown RBP eCLIP3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 CFHR1Q03591 330 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 ZNF543Q08ER8 600 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 STK3Q13188 491 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 CYP1B1Q16678 543 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 TMTC4Q5T4D3 741 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 PLAG1Q6DJT9 500 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 UBE2Q1Q7Z7E8 422 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 CCDC33Q8N5R6 958 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 ATP11CQ8NB49 1132 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 DNASE2BQ8WZ79 361 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 HS6ST2Q96MM7 605 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 COLEC11Q9BWP8 271 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 HEYLQ9NQ87 328 aaPredicted RBP3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 SNX15Q9NRS6 342 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 ASIC5Q9NY37 505 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 DNAJB11Q9UBS4 358 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 DKK4Q9UBT3 224 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 CAPN11Q9UMQ6 739 aa3.71□□□□□ -1.82
HDGFL3-202ENST00000562702 CLCA1A8K7I4 914 aa3.7□□□□□ -1.82
HDGFL3-202ENST00000562702 SNX2O60749 519 aa3.7□□□□□ -1.82
HDGFL3-202ENST00000562702 HGFP14210 728 aa3.7□□□□□ -1.82
HDGFL3-202ENST00000562702 CD19P15391 556 aa3.7□□□□□ -1.82
HDGFL3-202ENST00000562702 TSHRP16473 764 aa3.7□□□□□ -1.82
HDGFL3-202ENST00000562702 GKP32189 559 aa3.7□□□□□ -1.82
HDGFL3-202ENST00000562702 IL6STP40189 918 aaPredicted RBP3.7□□□□□ -1.82
HDGFL3-202ENST00000562702 PRIM2P49643 509 aa3.7□□□□□ -1.82
HDGFL3-202ENST00000562702 GATMP50440 423 aa3.7□□□□□ -1.82
HDGFL3-202ENST00000562702 TIRAPP58753 221 aa3.7□□□□□ -1.82
HDGFL3-202ENST00000562702 HILS1P60008 231 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms