RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 TRIM49D1C9J1S8 452 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 COPEO14579 308 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 FAM155BO75949 473 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 UBTFL6P0CB48 400 aaPredicted RBP11.37□□□□□ -0.59
NEIL1-202ENST00000561643 DESP17661 470 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 PTPN4P29074 926 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 YWHAZP63104 245 aaKnown RBP11.37□□□□□ -0.59
NEIL1-202ENST00000561643 INCA1Q0VD86 236 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 FAM187BQ17R55 369 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 CCDC14Q49A88 953 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 ZNF484Q5JVG2 852 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 RASIP1Q5U651 963 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 SLC26A11Q86WA9 606 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 SULF1Q8IWU6 871 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 NLRP7Q8WX94 980 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 KIF12Q96FN5 646 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 CLMNQ96JQ2 1002 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 ACAP3Q96P50 834 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 SAR1AQ9NR31 198 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 KANSL3Q9P2N6 904 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 MGAMO43451 1857 aa11.37□□□□□ -0.59
NEIL1-202ENST00000561643 HAUS5O94927 633 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 ETS2P15036 469 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 OSBPP22059 807 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 IREB2P48200 963 aaKnown RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 NEK3P51956 506 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 SPDYAQ5MJ70 313 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 TTC39BQ5VTQ0 682 aaPredicted RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 RBM12BQ8IXT5 1001 aaKnown RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 GBA2Q9HCG7 927 aaPredicted RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 FAM49BQ9NUQ9 324 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 RNF181Q9P0P0 153 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 RBPJLQ9UBG7 517 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 KIAA1257Q9ULG3 409 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 KRT37O76014 449 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 LGALS2P05162 132 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 TGM2P21980 687 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 ETV4P43268 484 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 SLC18A2Q05940 514 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 MPP3Q13368 585 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 PMF1Q6P1K2 205 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 CHSY1Q86X52 802 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 TTC39CQ8N584 583 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 CCDC110Q8TBZ0 833 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 DCPSQ96C86 337 aaKnown RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 DTNBP1Q96EV8 351 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 PCDH18Q9HCL0 1135 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 LRCH1Q9Y2L9 728 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 NUMBLQ9Y6R0 609 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 A0A0G2JMZ2 1700 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 POLR2AP24928 1970 aaKnown RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 BRCA1P38398 1863 aaKnown RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 DNAJC25-GNG10A0A024R161 153 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 PFKMP08237 780 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 DHRS4L1P0CG22 281 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 ZCCHC18P0CG32 403 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 IL4RP24394 825 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 KYAT1Q16773 422 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 CA9Q16790 459 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 KHDC1Q4VXA5 237 aaKnown RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 CMPK2Q5EBM0 449 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 PPP1R26Q5T8A7 1209 aaPredicted RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 RFWD3Q6PCD5 774 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 ACOT1Q86TX2 421 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 SCUBE3Q8IX30 993 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 PQLC3Q8N755 202 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 ENDOVQ8N8Q3 282 aaKnown RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 PCDH19Q8TAB3 1148 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 SCG3Q8WXD2 468 aaKnown RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 SRPK1Q96SB4 655 aaKnown RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 SNRNP25Q9BV90 132 aaKnown RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 TMEM120AQ9BXJ8 343 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 FRMD8Q9BZ67 464 aaPredicted RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 DMAP1Q9NPF5 467 aaPredicted RBP11.36□□□□□ -0.59
NEIL1-202ENST00000561643 ETNK2Q9NVF9 386 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 TTLL3Q9Y4R7 772 aa11.36□□□□□ -0.59
NEIL1-202ENST00000561643 PTPRFP10586 1907 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 TRAFD1O14545 582 aaPredicted RBP11.35□□□□□ -0.59
NEIL1-202ENST00000561643 HNRNPCL1O60812 293 aaKnown RBP11.35□□□□□ -0.59
NEIL1-202ENST00000561643 SNRPAP09012 282 aaKnown RBP11.35□□□□□ -0.59
NEIL1-202ENST00000561643 SERPINB3P29508 390 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 POU5F1BQ06416 359 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 TTLL12Q14166 644 aaPredicted RBP11.35□□□□□ -0.59
NEIL1-202ENST00000561643 STILQ15468 1287 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 LGSNQ5TDP6 509 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 SNX30Q5VWJ9 437 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 ERO1BQ86YB8 467 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 HESX1Q9UBX0 185 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 PHF24Q9UPV7 400 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 MTO1Q9Y2Z2 717 aaKnown RBP11.35□□□□□ -0.59
NEIL1-202ENST00000561643 SNX9Q9Y5X1 595 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 MAD1L1Q9Y6D9 718 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 LRRC37A2A6NM11 1700 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 SPATA31D3P0C874 917 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 VHLP40337 213 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 PRKD1Q15139 912 aaPredicted RBP11.35□□□□□ -0.59
NEIL1-202ENST00000561643 CTC1Q2NKJ3 1217 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 OLFML1Q6UWY5 402 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 SPATA31D4Q6ZUB0 917 aa11.35□□□□□ -0.59
NEIL1-202ENST00000561643 DTX3LQ8TDB6 740 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms