RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 COG7P83436 770 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 GCNT1Q02742 428 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 PUM1Q14671 1186 aaKnown RBP eCLIP18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 PLK5Q496M5 336 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 EOGTQ5NDL2 527 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 LCLAT1Q6UWP7 414 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 PRR23CQ6ZRP0 262 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 TOGARAM2Q6ZUX3 1019 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 EHBP1Q8NDI1 1231 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 EDEM1Q92611 657 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 XPO6Q96QU8 1125 aaKnown RBP18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 MED15Q96RN5 788 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 ARRDC1-AS1Q9H2J1 176 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 WDR35Q9P2L0 1181 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 CDV3Q9UKY7 258 aaKnown RBP18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 HCN2Q9UL51 889 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 KIAA1257Q9ULG3 409 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 STRIP2Q9ULQ0 834 aa18.02■□□□□ 0.48
CDC42BPB-208ENST00000561271 NUMA1Q14980 2115 aa18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 ASCC3Q8N3C0 2202 aaKnown RBP18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 YJEFN3A6XGL0 299 aa18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 E7ENQ6 273 aa18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 FGFR1OPO95684 399 aaKnown RBP18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 GBP1P32455 592 aa18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 CSRP2Q16527 193 aa18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 HSF5Q4G112 596 aaPredicted RBP18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 PREPLQ4J6C6 727 aaPredicted RBP18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 EGFLAMQ63HQ2 1017 aa18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 ERMP1Q7Z2K6 904 aa18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 DGLUCYQ7Z3D6 616 aa18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 CREBRFQ8IUR6 639 aa18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 DENND1CQ8IV53 801 aa18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 KCTD13Q8WZ19 329 aa18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 ZC3H10Q96K80 434 aaKnown RBP18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 DUSP15Q9H1R2 295 aaPredicted RBP18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 CLSTN2Q9H4D0 955 aa18.01■□□□□ 0.47
CDC42BPB-208ENST00000561271 TCRBV21S2A2A0A5A6 115 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 PRR5-ARHGAP8B1AHC4 643 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 GABBR2O75899 941 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 KRT5P13647 590 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 BCKDHBP21953 392 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 ANP32AP39687 249 aaKnown RBP18■□□□□ 0.47
CDC42BPB-208ENST00000561271 WASP42768 502 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 DGKGP49619 791 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 DAOAP59103 153 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 ARHGAP8P85298 464 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 SF3A2Q15428 464 aaKnown RBP18■□□□□ 0.47
CDC42BPB-208ENST00000561271 BSPRYQ5W0U4 402 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 PMF1Q6P1K2 205 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 FMNL3Q8IVF7 1028 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 CLEC4CQ8WTT0 213 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 SLC35F5Q8WV83 523 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 HMGB4Q8WW32 186 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 PLD4Q96BZ4 506 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 LOXL4Q96JB6 756 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 CRACR2AQ9BSW2 395 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 DCLK3Q9C098 648 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 SMOC1Q9H4F8 434 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 CNGB3Q9NQW8 809 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 OLA1Q9NTK5 396 aaKnown RBP18■□□□□ 0.47
CDC42BPB-208ENST00000561271 BCCIPQ9P287 314 aaKnown RBP eCLIP18■□□□□ 0.47
CDC42BPB-208ENST00000561271 SFMBT1Q9UHJ3 866 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 AGO1Q9UL18 857 aaKnown RBP18■□□□□ 0.47
CDC42BPB-208ENST00000561271 ZNF510Q9Y2H8 683 aa18■□□□□ 0.47
CDC42BPB-208ENST00000561271 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 PRRT4C9JH25 899 aa17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 MSI1O43347 362 aaKnown RBP17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 ALDH1A2O94788 518 aa17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 HOXB2P14652 356 aa17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 MPLP40238 635 aa17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 STILQ15468 1287 aa17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 ELF2Q15723 593 aa17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 CNGA2Q16280 664 aa17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 USP39Q53GS9 565 aaKnown RBP17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 FYB2Q5VWT5 728 aa17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 GJB7Q6PEY0 223 aa17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 NUDT18Q6ZVK8 323 aa17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 TRMT11Q7Z4G4 463 aaKnown RBP17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 RNF139Q8WU17 664 aa17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 ERLEC1Q96DZ1 483 aa17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 ACOX2Q99424 681 aa17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 POLMQ9NP87 494 aaPredicted RBP17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 CACNA1EQ15878 2313 aa17.99■□□□□ 0.47
CDC42BPB-208ENST00000561271 GDF9O60383 454 aa17.98■□□□□ 0.47
CDC42BPB-208ENST00000561271 PENKP01210 267 aaPredicted RBP17.98■□□□□ 0.47
CDC42BPB-208ENST00000561271 APBA1Q02410 837 aa17.98■□□□□ 0.47
CDC42BPB-208ENST00000561271 DPCR1Q3MIW9 517 aa17.98■□□□□ 0.47
CDC42BPB-208ENST00000561271 PMS2CLQ68D20 193 aa17.98■□□□□ 0.47
CDC42BPB-208ENST00000561271 TRIM65Q6PJ69 517 aa17.98■□□□□ 0.47
CDC42BPB-208ENST00000561271 IRF2BP1Q8IU81 584 aa17.98■□□□□ 0.47
CDC42BPB-208ENST00000561271 RLN3Q8WXF3 142 aa17.98■□□□□ 0.47
CDC42BPB-208ENST00000561271 UBE2TQ9NPD8 197 aaPredicted RBP17.98■□□□□ 0.47
CDC42BPB-208ENST00000561271 CISD3P0C7P0 127 aa17.97■□□□□ 0.47
CDC42BPB-208ENST00000561271 NTSR1P30989 418 aa17.97■□□□□ 0.47
CDC42BPB-208ENST00000561271 CHKAP35790 457 aa17.97■□□□□ 0.47
CDC42BPB-208ENST00000561271 ATXN1P54253 815 aaKnown RBP17.97■□□□□ 0.47
CDC42BPB-208ENST00000561271 CREB5Q02930 508 aa17.97■□□□□ 0.47
CDC42BPB-208ENST00000561271 TRIP4Q15650 581 aaPredicted RBP17.97■□□□□ 0.47
CDC42BPB-208ENST00000561271 CHPFQ8IZ52 775 aa17.97■□□□□ 0.47
CDC42BPB-208ENST00000561271 SCML4Q8N228 414 aa17.97■□□□□ 0.47
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