RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 MUC22E2RYF6 1773 aaPredicted RBP16.74■□□□□ 0.27
LMX1B-204ENST00000561065 CEP192Q8TEP8 1941 aa16.74■□□□□ 0.27
LMX1B-204ENST00000561065 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.73■□□□□ 0.27
LMX1B-204ENST00000561065 TBC1D3BA6NDS4 549 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 PRRT4C9JH25 899 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 MBD3O95983 291 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 ZBED1O96006 694 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 AFPP02771 609 aaKnown RBP16.73■□□□□ 0.27
LMX1B-204ENST00000561065 HMBSP08397 361 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 VDRP11473 427 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 ZNF132P52740 706 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 GOLGA8FQ08AF8 430 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 GOLGA8DPQ0D2H9 430 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 HSF5Q4G112 596 aaPredicted RBP16.73■□□□□ 0.27
LMX1B-204ENST00000561065 GRAMD4Q6IC98 578 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 PPM1KQ8N3J5 372 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 ZNF513Q8N8E2 541 aaPredicted RBP16.73■□□□□ 0.27
LMX1B-204ENST00000561065 KREMEN1Q96MU8 473 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 ACOX2Q99424 681 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 CD248Q9HCU0 757 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 LMBRD1Q9NUN5 540 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 PLK2Q9NYY3 685 aa16.73■□□□□ 0.27
LMX1B-204ENST00000561065 CISD3P0C7P0 127 aa16.72■□□□□ 0.27
LMX1B-204ENST00000561065 BRD2P25440 801 aaKnown RBP16.72■□□□□ 0.27
LMX1B-204ENST00000561065 CORO1AP31146 461 aaKnown RBP16.72■□□□□ 0.27
LMX1B-204ENST00000561065 MPLP40238 635 aa16.72■□□□□ 0.27
LMX1B-204ENST00000561065 KCNH2Q12809 1159 aa16.72■□□□□ 0.27
LMX1B-204ENST00000561065 EOGTQ5NDL2 527 aa16.72■□□□□ 0.27
LMX1B-204ENST00000561065 FYB2Q5VWT5 728 aa16.72■□□□□ 0.27
LMX1B-204ENST00000561065 PMS2CLQ68D20 193 aa16.72■□□□□ 0.27
LMX1B-204ENST00000561065 TCEAL6Q6IPX3 200 aa16.72■□□□□ 0.27
LMX1B-204ENST00000561065 RRAGAQ7L523 313 aa16.72■□□□□ 0.27
LMX1B-204ENST00000561065 TADA2BQ86TJ2 420 aa16.72■□□□□ 0.27
LMX1B-204ENST00000561065 FRMD1Q8N878 549 aa16.72■□□□□ 0.27
LMX1B-204ENST00000561065 NETO1Q8TDF5 533 aa16.72■□□□□ 0.27
LMX1B-204ENST00000561065 TCEAL3Q969E4 200 aa16.72■□□□□ 0.27
LMX1B-204ENST00000561065 MARCH2Q9P0N8 246 aa16.72■□□□□ 0.27
LMX1B-204ENST00000561065 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.72■□□□□ 0.27
LMX1B-204ENST00000561065 PCDHB4Q9Y5E5 795 aa16.72■□□□□ 0.27
LMX1B-204ENST00000561065 TCRBV21S2A2A0A5A6 115 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 DCDC2BA2VCK2 349 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 YJEFN3A6XGL0 299 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 E7ENQ6 273 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 PENKP01210 267 aaPredicted RBP16.71■□□□□ 0.27
LMX1B-204ENST00000561065 PAEPP09466 180 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 ZNF806P0C7X5 589 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 SETSIPP0DME0 302 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 WASP42768 502 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 RGS7P49802 495 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 SMYD5Q6GMV2 418 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 LCLAT1Q6UWP7 414 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 ARHGAP18Q8N392 663 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 RBBP8NLQ8NC74 664 aaPredicted RBP16.71■□□□□ 0.27
LMX1B-204ENST00000561065 EHBP1Q8NDI1 1231 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 RLN3Q8WXF3 142 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 KCTD13Q8WZ19 329 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 CDK5RAP1Q96SZ6 601 aaKnown RBP16.71■□□□□ 0.27
LMX1B-204ENST00000561065 THAP9Q9H5L6 903 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 LRRC4Q9HBW1 653 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 HESX1Q9UBX0 185 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 AGO1Q9UL18 857 aaKnown RBP16.71■□□□□ 0.27
LMX1B-204ENST00000561065 STARD13Q9Y3M8 1113 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 PCDHGA5Q9Y5G8 931 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 CKAP5Q14008 2032 aa16.71■□□□□ 0.27
LMX1B-204ENST00000561065 A0A1W2PQF6 199 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 SLC12A8A0AV02 714 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 M0QYV0 167 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 PIK3R2O00459 728 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 SLC30A4O14863 429 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 GBP1P32455 592 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 P2RY2P41231 377 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 MTIF2P46199 727 aaKnown RBP16.7■□□□□ 0.26
LMX1B-204ENST00000561065 DGKGP49619 791 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 DAOAP59103 153 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 COG7P83436 770 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 GCNT1Q02742 428 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 STILQ15468 1287 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 ELF2Q15723 593 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 PMF1Q6P1K2 205 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 SASS6Q6UVJ0 657 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 RSRC2Q7L4I2 434 aaKnown RBP16.7■□□□□ 0.26
LMX1B-204ENST00000561065 ENOSF1Q7L5Y1 443 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 DENND1CQ8IV53 801 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 FAM217AQ8IXS0 508 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 CLEC4CQ8WTT0 213 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 SLC35F5Q8WV83 523 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 HMGB4Q8WW32 186 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 EDEM1Q92611 657 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 ERLEC1Q96DZ1 483 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 XPO6Q96QU8 1125 aaKnown RBP16.7■□□□□ 0.26
LMX1B-204ENST00000561065 RTKNQ9BST9 563 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 INTS2Q9H0H0 1204 aaKnown RBP16.7■□□□□ 0.26
LMX1B-204ENST00000561065 WDR35Q9P2L0 1181 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 MBD1Q9UIS9 605 aaPredicted RBP16.7■□□□□ 0.26
LMX1B-204ENST00000561065 FBXO10Q9UK96 956 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 CLEC4EQ9ULY5 219 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 BCLAF3A2AJT9 711 aaKnown RBP16.7■□□□□ 0.26
LMX1B-204ENST00000561065 MSI1O43347 362 aaKnown RBP16.7■□□□□ 0.26
LMX1B-204ENST00000561065 TPM2P07951 284 aa16.7■□□□□ 0.26
LMX1B-204ENST00000561065 LCP1P13796 627 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms