RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 MAP7D3Q8IWC1 876 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 RUNDC3BQ96NL0 473 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 RUFY1Q96T51 708 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 ADAM7Q9H2U9 754 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 C11orf49Q9H6J7 331 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 AAASQ9NRG9 546 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 ANAPC5Q9UJX4 755 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 STAP1Q9ULZ2 295 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 SMIM23A6NLE4 172 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 APOL1O14791 398 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 BANF1O75531 89 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 RDXP35241 583 aaKnown RBP11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 ALDH7A1P49419 539 aaKnown RBP11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 GPS2Q13227 327 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 MGAT5BQ3V5L5 792 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 CEP85LQ5SZL2 805 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 C4orf50Q6ZRC1 276 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 SH2D3CQ8N5H7 860 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 RSAD2Q8WXG1 361 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 NT5C3BQ969T7 300 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 CSPG4P5Q96PW8 444 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 SEPT5Q99719 369 aaPredicted RBP11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 COLEC11Q9BWP8 271 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 SEZ6LQ9BYH1 1024 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 FAM204AQ9H8W3 233 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 NMUR1Q9HB89 426 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 WDR6Q9NNW5 1121 aaKnown RBP11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 OSER1Q9NX31 292 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 FEZ2Q9UHY8 353 aaPredicted RBP11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 TNFRSF10BO14763 440 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 MCF2LO15068 1137 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 FBXO21O94952 628 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 RBL1P28749 1068 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 SCNN1AP37088 669 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 PMS2P54278 862 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 SLC29A2Q14542 456 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 PDK2Q15119 407 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 MAPRE1Q15691 268 aaKnown RBP11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 DPYSL2Q16555 572 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 TTMPQ5BVD1 217 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 ARCQ7LC44 396 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 TAC4Q86UU9 113 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 CCDC89Q8N998 374 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 TEKT4Q8WW24 435 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 RNF34Q969K3 372 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 LRRC45Q96CN5 670 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 EPB41L4BQ9H329 900 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 CDY1Q9Y6F8 540 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 SF3B1O75533 1304 aaKnown RBP eCLIP11.29□□□□□ -0.64e-7■■■■■ 34.5
SNRPA1-211ENST00000560433 C5orf42Q9H799 3197 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 A0A1W2PQH9 124 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 TCRBV7S3A2A0A539 114 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 DGKIO75912 1065 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 ACSL3O95573 720 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 ITGAVP06756 1048 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 DUSP4Q13115 394 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 FAXCQ5TGI0 409 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 CAPN12Q6ZSI9 719 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 MREGQ8N565 214 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 GIPC2Q8TF65 315 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 NKD2Q969F2 451 aaPredicted RBP11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 VN1R3Q9BXE9 311 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 TKTL2Q9H0I9 626 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 ACBD3Q9H3P7 528 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 WHRNQ9P202 907 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 MTRF1LQ9UGC7 380 aaKnown RBP11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 EFR3BQ9Y2G0 817 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 USP3Q9Y6I4 520 aa11.29□□□□□ -0.6
SNRPA1-211ENST00000560433 H0YGN5 161 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 SYN3O14994 580 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 KCNN4O15554 427 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 PPFIA2O75334 1257 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 VNN2O95498 520 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 TBX18O95935 607 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 RAG1P15918 1043 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 ITIH2P19823 946 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 FGFR3P22607 806 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 RPL22P35268 128 aaKnown RBP11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 NUMBP49757 651 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 YWHAGP61981 247 aaKnown RBP eCLIP11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 NOMO1Q15155 1222 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 ANKRD22Q5VYY1 191 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 PM20D1Q6GTS8 502 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 ZNF280DQ6N043 979 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 CNKSR3Q6P9H4 555 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 RHBDF2Q6PJF5 856 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 BNIPLQ7Z465 357 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 SCD5Q86SK9 330 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 DCP1BQ8IZD4 617 aaKnown RBP11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 LRRC43Q8N309 656 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 EIF1ADQ8N9N8 165 aaKnown RBP11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 AUTS2Q8WXX7 1259 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 CASP10Q92851 521 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 ZNF670Q9BS34 389 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 CEP41Q9BYV8 373 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 TXLNGYQ9BZA5 131 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 SIK2Q9H0K1 926 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 WDCPQ9H6R7 721 aa11.28□□□□□ -0.6
SNRPA1-211ENST00000560433 CWH43Q9H720 699 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms