RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 TFAMQ00059 246 aaKnown RBP21.65■■□□□ 1.06
PSEN1-225ENST00000560005 CYP24A1Q07973 514 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 SCAPQ12770 1279 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 DHCR24Q15392 516 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 ZNF423Q2M1K9 1284 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 HSF5Q4G112 596 aaPredicted RBP21.65■■□□□ 1.06
PSEN1-225ENST00000560005 C12orf40Q86WS4 652 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 NT5DC4Q86YG4 428 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 ADGRG2Q8IZP9 1017 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 TMEM86AQ8N2M4 240 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 MINDY1Q8N5J2 469 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 OR2I1PQ8NGU4 316 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 CEP76Q8TAP6 659 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 KIAA1524Q8TCG1 905 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 PARD3BQ8TEW8 1205 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 SAAL1Q96ER3 474 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 FUBP3Q96I24 572 aaKnown RBP eCLIP21.65■■□□□ 1.06
PSEN1-225ENST00000560005 DNAJC7Q99615 494 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 FAM213AQ9BRX8 229 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 ABHD10Q9NUJ1 306 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 MYO6Q9UM54 1294 aa21.65■■□□□ 1.06
PSEN1-225ENST00000560005 GOLGA8IPA6NC78 632 aa21.64■■□□□ 1.05
PSEN1-225ENST00000560005 GOLGA8JA6NMD2 632 aa21.64■■□□□ 1.05
PSEN1-225ENST00000560005 FECHP22830 423 aa21.64■■□□□ 1.05
PSEN1-225ENST00000560005 KIR2DL1P43626 348 aaPredicted RBP21.64■■□□□ 1.05
PSEN1-225ENST00000560005 WNT7BP56706 349 aa21.64■■□□□ 1.05
PSEN1-225ENST00000560005 CDK17Q00537 523 aa21.64■■□□□ 1.05
PSEN1-225ENST00000560005 RPL6Q02878 288 aaKnown RBP21.64■■□□□ 1.05
PSEN1-225ENST00000560005 KDSRQ06136 332 aa21.64■■□□□ 1.05
PSEN1-225ENST00000560005 PSMD6Q15008 389 aa21.64■■□□□ 1.05
PSEN1-225ENST00000560005 SCARA3Q6AZY7 606 aa21.64■■□□□ 1.05
PSEN1-225ENST00000560005 PDZD3Q86UT5 571 aa21.64■■□□□ 1.05
PSEN1-225ENST00000560005 CBWD2Q8IUF1 395 aa21.64■■□□□ 1.05
PSEN1-225ENST00000560005 C1orf127Q8N9H9 656 aa21.64■■□□□ 1.05
PSEN1-225ENST00000560005 SYN2Q92777 582 aaPredicted RBP21.64■■□□□ 1.05
PSEN1-225ENST00000560005 CAPN10Q9HC96 672 aa21.64■■□□□ 1.05
PSEN1-225ENST00000560005 ARHGEF4Q9NR80 690 aa21.64■■□□□ 1.05
PSEN1-225ENST00000560005 FAM207AQ9NSI2 230 aaPredicted RBP21.64■■□□□ 1.05
PSEN1-225ENST00000560005 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.64■■□□□ 1.05
PSEN1-225ENST00000560005 PCDH15Q96QU1 1955 aa21.63■■□□□ 1.05
PSEN1-225ENST00000560005 ZNF500O60304 480 aaPredicted RBP21.63■■□□□ 1.05
PSEN1-225ENST00000560005 SERPINF2P08697 491 aa21.63■■□□□ 1.05
PSEN1-225ENST00000560005 CD59P13987 128 aa21.63■■□□□ 1.05
PSEN1-225ENST00000560005 PON1P27169 355 aa21.63■■□□□ 1.05
PSEN1-225ENST00000560005 COL28A1Q2UY09 1125 aa21.63■■□□□ 1.05
PSEN1-225ENST00000560005 KRT39Q6A163 491 aa21.63■■□□□ 1.05
PSEN1-225ENST00000560005 ADGRF2Q8IZF7 708 aa21.63■■□□□ 1.05
PSEN1-225ENST00000560005 FAM84AQ96KN4 292 aa21.63■■□□□ 1.05
PSEN1-225ENST00000560005 FAM81BQ96LP2 452 aa21.63■■□□□ 1.05
PSEN1-225ENST00000560005 TMEM8AQ9HCN3 771 aa21.63■■□□□ 1.05
PSEN1-225ENST00000560005 SMPD4Q9NXE4 827 aa21.63■■□□□ 1.05
PSEN1-225ENST00000560005 TRPM5Q9NZQ8 1165 aa21.63■■□□□ 1.05
PSEN1-225ENST00000560005 SNX9Q9Y5X1 595 aa21.63■■□□□ 1.05
PSEN1-225ENST00000560005 CPQQ9Y646 472 aa21.63■■□□□ 1.05
PSEN1-225ENST00000560005 PFKLP17858 780 aa21.62■■□□□ 1.05
PSEN1-225ENST00000560005 PCSK1P29120 753 aa21.62■■□□□ 1.05
PSEN1-225ENST00000560005 HNRNPH3P31942 346 aaKnown RBP21.62■■□□□ 1.05
PSEN1-225ENST00000560005 EIF2DP41214 584 aaKnown RBP21.62■■□□□ 1.05
PSEN1-225ENST00000560005 MAGEA11P43364 429 aa21.62■■□□□ 1.05
PSEN1-225ENST00000560005 USP46P62068 366 aa21.62■■□□□ 1.05
PSEN1-225ENST00000560005 CLDN10P78369 228 aa21.62■■□□□ 1.05
PSEN1-225ENST00000560005 EHBP1Q8NDI1 1231 aa21.62■■□□□ 1.05
PSEN1-225ENST00000560005 CAMK1GQ96NX5 476 aa21.62■■□□□ 1.05
PSEN1-225ENST00000560005 CRACR2AQ9BSW2 395 aa21.62■■□□□ 1.05
PSEN1-225ENST00000560005 RNF38Q9H0F5 515 aa21.62■■□□□ 1.05
PSEN1-225ENST00000560005 KCND1Q9NSA2 647 aa21.62■■□□□ 1.05
PSEN1-225ENST00000560005 ACACAQ13085 2346 aa21.62■■□□□ 1.05
PSEN1-225ENST00000560005 MYOFQ9NZM1 2061 aa21.62■■□□□ 1.05
PSEN1-225ENST00000560005 CEP192Q8TEP8 1941 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 APC2O95996 2303 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 MYO18AQ92614 2054 aaKnown RBP21.61■■□□□ 1.05
PSEN1-225ENST00000560005 ARHGAP33O14559 1287 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 SLC9A3R1O14745 358 aaPredicted RBP21.61■■□□□ 1.05
PSEN1-225ENST00000560005 GABRDO14764 452 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 ATP2C2O75185 946 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 TRIM49P0CI25 452 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 TRIM49CP0CI26 452 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 GRIA2P42262 883 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 LHX1P48742 406 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 KLK7P49862 253 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 MXI1P50539 228 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 SLC7A9P82251 487 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 ZNF33AQ06730 810 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 HNRNPDQ14103 355 aaKnown RBP21.61■■□□□ 1.05
PSEN1-225ENST00000560005 KLHDC7AQ5VTJ3 777 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 FAM171BQ6P995 826 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 RHBDF2Q6PJF5 856 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 C4orf50Q6ZRC1 276 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 DENND5BQ6ZUT9 1274 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 TOP6BLQ8N6T0 577 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 LRRC52Q8N7C0 313 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 MYLPFQ96A32 169 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 SPATA17Q96L03 361 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 GDAP2Q9NXN4 497 aa21.61■■□□□ 1.05
PSEN1-225ENST00000560005 RBAKQ9NYW8 714 aaPredicted RBP21.61■■□□□ 1.05
PSEN1-225ENST00000560005 FLNBO75369 2602 aaKnown RBP21.6■■□□□ 1.05
PSEN1-225ENST00000560005 A0A0A0MRY4 1105 aa21.6■■□□□ 1.05
PSEN1-225ENST00000560005 ZSCAN12O43309 604 aa21.6■■□□□ 1.05
PSEN1-225ENST00000560005 ADH1CP00326 375 aa21.6■■□□□ 1.05
PSEN1-225ENST00000560005 KRT19P08727 400 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms