RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 IL1R2P27930 398 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 GABRR2P28476 465 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 NOP2P46087 812 aaKnown RBP9.79□□□□□ -0.84
HERC1-206ENST00000559996 PPP3CCP48454 512 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 PTPN5P54829 565 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 TAS2R40P59535 323 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 CYP4F8P98187 520 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 MESDQ14696 234 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 VEPH1Q14D04 833 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 ATP13A4Q4VNC1 1196 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 DCAF6Q58WW2 860 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 BTBD8Q5XKL5 378 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 TXNDC8Q6A555 127 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 C11orf63Q6NUN7 778 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 DCUN1D2Q6PH85 259 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 KLHDC10Q6PID8 442 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 ITFG1Q8TB96 612 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 ADAMTS19Q8TE59 1207 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 DQX1Q8TE96 717 aaKnown RBP9.79□□□□□ -0.84
HERC1-206ENST00000559996 WBP2Q969T9 261 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 FAM149B1Q96BN6 582 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 PABPC5Q96DU9 382 aaKnown RBP9.79□□□□□ -0.84
HERC1-206ENST00000559996 SLC39A13Q96H72 371 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 ZSWIM3Q96MP5 696 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 SLITRK1Q96PX8 696 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 WDR24Q96S15 920 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 PEBP4Q96S96 227 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 CNPY3Q9BT09 278 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 ADAM7Q9H2U9 754 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 SFXN1Q9H9B4 322 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 PIGVQ9NUD9 493 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 DZANK1Q9NVP4 752 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 UXTQ9UBK9 157 aaPredicted RBP9.79□□□□□ -0.84
HERC1-206ENST00000559996 DPP7Q9UHL4 492 aa9.79□□□□□ -0.84
HERC1-206ENST00000559996 A0A1W2PRU2 124 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 DDX3YO15523 660 aaKnown RBP9.78□□□□□ -0.84
HERC1-206ENST00000559996 TLR5O60602 858 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 TRUB2O95900 331 aaKnown RBP9.78□□□□□ -0.84
HERC1-206ENST00000559996 IGLV3-27P01718 113 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 MYL4P12829 197 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 HOXB8P17481 243 aaPredicted RBP9.78□□□□□ -0.84
HERC1-206ENST00000559996 MAN1A1P33908 653 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 CXCR3P49682 368 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 PEX5P50542 639 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 TUBP50607 506 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 ATP11AP98196 1134 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 SLC25A11Q02978 314 aaKnown RBP9.78□□□□□ -0.84
HERC1-206ENST00000559996 PIGHQ14442 188 aaPredicted RBP9.78□□□□□ -0.84
HERC1-206ENST00000559996 ACAP1Q15027 740 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 PABPC1LQ4VXU2 614 aaKnown RBP9.78□□□□□ -0.84
HERC1-206ENST00000559996 ARHGAP29Q52LW3 1261 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 RARS2Q5T160 578 aaKnown RBP9.78□□□□□ -0.84
HERC1-206ENST00000559996 MEI1Q5TIA1 1274 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 CC2D1AQ6P1N0 951 aaPredicted RBP9.78□□□□□ -0.84
HERC1-206ENST00000559996 STRADAQ7RTN6 431 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 TAC4Q86UU9 113 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 SLC35F6Q8N357 371 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 ARHGAP18Q8N392 663 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 DEFB123Q8N688 67 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 PDZD8Q8NEN9 1154 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 RIN3Q8TB24 985 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 ADAM32Q8TC27 787 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 FAM172AQ8WUF8 416 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 SMG7Q92540 1137 aaKnown RBP9.78□□□□□ -0.84
HERC1-206ENST00000559996 PPP2R3CQ969Q6 453 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 CALR3Q96L12 384 aaKnown RBP9.78□□□□□ -0.84
HERC1-206ENST00000559996 APOL5Q9BWW9 433 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 KLF16Q9BXK1 252 aaPredicted RBP9.78□□□□□ -0.84
HERC1-206ENST00000559996 TLR10Q9BXR5 811 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 SMOC2Q9H3U7 446 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 TMPRSS4Q9NRS4 437 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 EHD2Q9NZN4 543 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 TRPM5Q9NZQ8 1165 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 IP6K2Q9UHH9 426 aa9.78□□□□□ -0.84
HERC1-206ENST00000559996 KCNU1A8MYU2 1149 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 ESPNB1AK53 854 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 M0QYT0 321 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 IRAK2O43187 625 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 MSI1O43347 362 aaKnown RBP9.77□□□□□ -0.85
HERC1-206ENST00000559996 NCK2O43639 380 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 ZNF500O60304 480 aaPredicted RBP9.77□□□□□ -0.85
HERC1-206ENST00000559996 XYLBO75191 536 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 FTCDO95954 541 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 CEBPBP17676 345 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 PSMA2P25787 234 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 MIPP30301 263 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 SDC4P31431 198 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 PCK1P35558 622 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 ARSEP51690 589 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 TEAD2Q15562 447 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 ZNF569Q5MCW4 686 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 HECTD3Q5T447 861 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 ANKS1BQ7Z6G8 1248 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 ELMOD1Q8N336 334 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 TXLNBQ8N3L3 684 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 ARL14EPQ8N8R7 260 aaPredicted RBP9.77□□□□□ -0.85
HERC1-206ENST00000559996 MAB21L3Q8N8X9 362 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 LEMD2Q8NC56 503 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 SUSD6Q92537 303 aa9.77□□□□□ -0.85
HERC1-206ENST00000559996 KRT35Q92764 455 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms