RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 ANKRD54Q6NXT1 300 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 MSANTD2Q6P1R3 559 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 GAREM2Q75VX8 874 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 STRADAQ7RTN6 431 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 TMEM150AQ86TG1 271 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 FAM131BQ86XD5 332 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 MIB1Q86YT6 1006 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 ARFGAP1Q8N6T3 406 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 UBL4BQ8N7F7 174 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 CENPIQ92674 756 aaPredicted RBP10.87□□□□□ -0.67
TPM1-221ENST00000559831 ACSF2Q96CM8 615 aaPredicted RBP10.87□□□□□ -0.67
TPM1-221ENST00000559831 TCEAL4Q96EI5 215 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 SERPINB11Q96P15 392 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 PSMB7Q99436 277 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 NCAPGQ9BPX3 1015 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 SMOC2Q9H3U7 446 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 PIGVQ9NUD9 493 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 KLHL11Q9NVR0 708 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 CLDND1Q9NY35 253 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.87□□□□□ -0.67
TPM1-221ENST00000559831 MARCH2Q9P0N8 246 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 CALCOCO1Q9P1Z2 691 aa10.87□□□□□ -0.67
TPM1-221ENST00000559831 SLC12A8A0AV02 714 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 MIF4GDA9UHW6 222 aaKnown RBP10.86□□□□□ -0.67
TPM1-221ENST00000559831 FANCGO15287 622 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 DDX3YO15523 660 aaKnown RBP10.86□□□□□ -0.67
TPM1-221ENST00000559831 IRAK2O43187 625 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 COCHO43405 550 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 PSTPIP1O43586 416 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 KRT1P04264 644 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 TUBB4AP04350 444 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 POU2F2P09086 479 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 MBL2P11226 248 aaPredicted RBP10.86□□□□□ -0.67
TPM1-221ENST00000559831 IL1R2P27930 398 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 CTNNA1P35221 906 aaKnown RBP10.86□□□□□ -0.67
TPM1-221ENST00000559831 PCK1P35558 622 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 ATP5C1P36542 298 aaKnown RBP10.86□□□□□ -0.67
TPM1-221ENST00000559831 CCR2P41597 374 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 EPHA5P54756 1037 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 SLC25A11Q02978 314 aaKnown RBP10.86□□□□□ -0.67
TPM1-221ENST00000559831 ADAM15Q13444 863 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 TEAD2Q15562 447 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 SMTNL2Q2TAL5 461 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 ARHGAP15Q53QZ3 475 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 GPR158Q5T848 1215 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 TXNDC8Q6A555 127 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 TXNRD3NBQ6F5E7 133 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 TMEM184AQ6ZMB5 413 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 Q7L0L9 218 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 RHOT1Q8IXI2 618 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 MAB21L3Q8N8X9 362 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 LEMD2Q8NC56 503 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 CMASQ8NFW8 434 aaPredicted RBP10.86□□□□□ -0.67
TPM1-221ENST00000559831 SHKBP1Q8TBC3 707 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 ING5Q8WYH8 240 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 HSPH1Q92598 858 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 KRT35Q92764 455 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 CD101Q93033 1021 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 NT5C3BQ969T7 300 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 PEBP4Q96S96 227 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 TLR10Q9BXR5 811 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 GPATCH2LQ9NWQ4 482 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 CHD7Q9P2D1 2997 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 DNMT3LQ9UJW3 386 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 USP18Q9UMW8 372 aa10.86□□□□□ -0.67
TPM1-221ENST00000559831 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.86□□□□□ -0.67
TPM1-221ENST00000559831 NUP210Q8TEM1 1887 aaPredicted RBP10.86□□□□□ -0.67
TPM1-221ENST00000559831 LAMA2P24043 3122 aaKnown RBP10.86□□□□□ -0.67
TPM1-221ENST00000559831 TRAV19A0A0A6YYK7 116 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 CCDC66A2RUB6 948 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 NRG2O14511 850 aaPredicted RBP10.85□□□□□ -0.67
TPM1-221ENST00000559831 KCNK3O14649 394 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 ENDOD1O94919 500 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 MOCS2O96007 188 aaPredicted RBP10.85□□□□□ -0.67
TPM1-221ENST00000559831 F9P00740 461 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 OAS1P00973 400 aaKnown RBP10.85□□□□□ -0.67
TPM1-221ENST00000559831 IGLV3-25P01717 112 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 IRF1P10914 325 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 POU3F3P20264 500 aaPredicted RBP10.85□□□□□ -0.67
TPM1-221ENST00000559831 CXCR5P32302 372 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 TUBP50607 506 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 TBX4P57082 545 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 SLC5A9Q2M3M2 681 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 ATP13A4Q4VNC1 1196 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 ODF2Q5BJF6 829 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 ZC3H12AQ5D1E8 599 aaKnown RBP10.85□□□□□ -0.67
TPM1-221ENST00000559831 KCNT1Q5JUK3 1230 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 STXBP5Q5T5C0 1151 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 BNIPLQ7Z465 357 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 CCDC185Q8N715 623 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 ARL14EPQ8N8R7 260 aaPredicted RBP10.85□□□□□ -0.67
TPM1-221ENST00000559831 TTC16Q8NEE8 873 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 KIF18AQ8NI77 898 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 MYLIPQ8WY64 445 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 PGAP3Q96FM1 320 aaPredicted RBP10.85□□□□□ -0.67
TPM1-221ENST00000559831 HES6Q96HZ4 224 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 CYP2S1Q96SQ9 504 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 SNRNP25Q9BV90 132 aaKnown RBP10.85□□□□□ -0.67
TPM1-221ENST00000559831 SLITRK6Q9H5Y7 841 aa10.85□□□□□ -0.67
TPM1-221ENST00000559831 WDCPQ9H6R7 721 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms