RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 METTL25Q8N6Q8 603 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 PJA1Q8NG27 643 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 MBD3L2Q8NHZ7 208 aaPredicted RBP4.39□□□□□ -1.71
SPG11-218ENST00000559754 NAP1L4Q99733 375 aaKnown RBP4.39□□□□□ -1.71
SPG11-218ENST00000559754 SARGQ9BW04 601 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 BRIP1Q9BX63 1249 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 USP29Q9HBJ7 922 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 PNMA2Q9UL42 364 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 SLC27A6Q9Y2P4 619 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 ZMYM2Q9UBW7 1377 aa4.39□□□□□ -1.71
SPG11-218ENST00000559754 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.38□□□□□ -1.71
SPG11-218ENST00000559754 ANO9A1A5B4 782 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 ADAM10O14672 748 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 FYB1O15117 783 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 INSIG1O15503 277 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 THAP12O43422 761 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 WDR47O94967 919 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 CD63P08962 238 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 NBPF7P0C2Y1 421 aaPredicted RBP4.38□□□□□ -1.71
SPG11-218ENST00000559754 HOXD9P28356 352 aaPredicted RBP4.38□□□□□ -1.71
SPG11-218ENST00000559754 NTSR1P30989 418 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 DGKQP52824 942 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 COPAP53621 1224 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 GPC5P78333 572 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 HTRA4P83105 476 aaPredicted RBP4.38□□□□□ -1.71
SPG11-218ENST00000559754 CFHR1Q03591 330 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 POU5F1BQ06416 359 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 PICALMQ13492 652 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 RAPGEF1Q13905 1077 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 FAM110CQ1W6H9 321 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 SLC9C1Q4G0N8 1177 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 UBE2Q1Q7Z7E8 422 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 ANKRD13BQ86YJ7 626 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 P3H2Q8IVL5 708 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 SPICE1Q8N0Z3 855 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.38□□□□□ -1.71
SPG11-218ENST00000559754 TTC17Q96AE7 1141 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 KAZALD1Q96I82 304 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 SELENOOQ9BVL4 669 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 ADGRE3Q9BY15 652 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 PNPLA8Q9NP80 782 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 HEYLQ9NQ87 328 aaPredicted RBP4.38□□□□□ -1.71
SPG11-218ENST00000559754 TBC1D23Q9NUY8 699 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 ASAP1Q9ULH1 1129 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 SNX13Q9Y5W8 968 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 SPATA31A1Q5TZJ5 1347 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 COL15A1P39059 1388 aa4.38□□□□□ -1.71
SPG11-218ENST00000559754 TLR2O60603 784 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 CNOT3O75175 753 aaKnown RBP4.37□□□□□ -1.71
SPG11-218ENST00000559754 IL18RAPO95256 599 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 NTN1O95631 604 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 CTSAP10619 480 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 PRF1P14222 555 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 SCP2P22307 547 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 JAK3P52333 1124 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 FOXG1P55316 489 aaPredicted RBP4.37□□□□□ -1.71
SPG11-218ENST00000559754 SRSF1Q07955 248 aaKnown RBP eCLIP4.37□□□□□ -1.71
SPG11-218ENST00000559754 SLC14A1Q13336 389 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 FHL1Q13642 323 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 SEC23BQ15437 767 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 TMEM95Q3KNT9 176 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 GRAMD1BQ3KR37 738 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 CLEC4GQ6UXB4 293 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 KRT78Q8N1N4 520 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 NRACQ8N912 160 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 NSMCE1Q8WV22 266 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 PHKBQ93100 1093 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 WACQ9BTA9 647 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 TRMOQ9BU70 441 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 NUAK2Q9H093 628 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 SLC25A32Q9H2D1 315 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 ARL8BQ9NVJ2 186 aa4.37□□□□□ -1.71
SPG11-218ENST00000559754 LY6G6EA0A0G2JKS1 128 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 TMIGD3P0DMS9 266 aaPredicted RBP4.36□□□□□ -1.71
SPG11-218ENST00000559754 SNHG28P0DPA3 235 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 THBS4P35443 961 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 STIM1Q13586 685 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 DAG1Q14118 895 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 INO80DQ53TQ3 878 aaPredicted RBP4.36□□□□□ -1.71
SPG11-218ENST00000559754 ZNF517Q6ZMY9 492 aaPredicted RBP4.36□□□□□ -1.71
SPG11-218ENST00000559754 KRT28Q7Z3Y7 464 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 IRF2BP2Q7Z5L9 587 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 NME8Q8N427 588 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 ABHD5Q8WTS1 349 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 IQCDQ96DY2 449 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 SENP7Q9BQF6 1050 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 ZBTB26Q9HCK0 441 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 POT1Q9NUX5 634 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 TMEM184CQ9NVA4 438 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 TAGLN3Q9UI15 199 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 ANAPC4Q9UJX5 808 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 PCDHGB6Q9Y5F9 930 aa4.36□□□□□ -1.71
SPG11-218ENST00000559754 FAM90A10PA6NDY2 464 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 RHPN2P1A8MT19 583 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 TRIM38O00635 465 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 INPPL1O15357 1258 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 CA12O43570 354 aa4.35□□□□□ -1.71
SPG11-218ENST00000559754 CCNT2O60583 730 aaKnown RBP4.35□□□□□ -1.71
SPG11-218ENST00000559754 PRAMEF2O60811 474 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms