RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 DAB1O75553 588 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 LCA5LO95447 670 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 IGLV3-27P01718 113 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 ATP5C1P36542 298 aaKnown RBP9.45□□□□□ -0.9
HMG20A-209ENST00000559728 OGDHQ02218 1023 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 FCHO2Q0JRZ9 810 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 MAMLD1Q13495 774 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 GRM2Q14416 872 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 TRIP4Q15650 581 aaPredicted RBP9.45□□□□□ -0.9
HMG20A-209ENST00000559728 EFHC1Q5JVL4 640 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 FAM102AQ5T9C2 384 aaPredicted RBP9.45□□□□□ -0.9
HMG20A-209ENST00000559728 BTBD8Q5XKL5 378 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 PLEKHA7Q6IQ23 1121 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 Q6ZNB5 142 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 ARCQ7LC44 396 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 TAC4Q86UU9 113 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 RNF135Q8IUD6 432 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 GJD3Q8N144 294 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 EMC1Q8N766 993 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 C3orf20Q8ND61 904 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 SH3RF2Q8TEC5 729 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 IPO4Q8TEX9 1081 aaKnown RBP9.45□□□□□ -0.9
HMG20A-209ENST00000559728 ARHGEF26Q96DR7 871 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 SLC39A13Q96H72 371 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 VCPIP1Q96JH7 1222 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 PDLIM2Q96JY6 352 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 NPY6RQ99463 290 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 DDX23Q9BUQ8 820 aaKnown RBP9.45□□□□□ -0.9
HMG20A-209ENST00000559728 TRIM7Q9C029 511 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 THAP2Q9H0W7 228 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 SLITRK6Q9H5Y7 841 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 POPDC2Q9HBU9 364 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 ANLNQ9NQW6 1124 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 SPTLC3Q9NUV7 552 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 SEPT11Q9NVA2 429 aaKnown RBP9.45□□□□□ -0.9
HMG20A-209ENST00000559728 SMPD4Q9NXE4 827 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 OBP2AQ9NY56 170 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 ZMYM5Q9UJ78 669 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 REXO2Q9Y3B8 237 aaKnown RBP9.45□□□□□ -0.9
HMG20A-209ENST00000559728 NR2E1Q9Y466 385 aa9.45□□□□□ -0.9
HMG20A-209ENST00000559728 DOCK8Q8NF50 2099 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 OTOL1A6NHN0 477 aaPredicted RBP9.44□□□□□ -0.9
HMG20A-209ENST00000559728 SOWAHDA6NJG2 315 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 C2CD4BA6NLJ0 364 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 SIGLEC16A6NMB1 481 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 SART1O43290 800 aaKnown RBP9.44□□□□□ -0.9
HMG20A-209ENST00000559728 NARSO43776 548 aaKnown RBP9.44□□□□□ -0.9
HMG20A-209ENST00000559728 STC2O76061 302 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 CALB1P05937 261 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 CKMP06732 381 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 TPM1P09493 284 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 MBL2P11226 248 aaPredicted RBP9.44□□□□□ -0.9
HMG20A-209ENST00000559728 RALAP11233 206 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 NCAM1P13591 858 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 RFC1P35251 1148 aaPredicted RBP9.44□□□□□ -0.9
HMG20A-209ENST00000559728 AVPR1AP37288 418 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 MATKP42679 507 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 ATXN1P54253 815 aaKnown RBP9.44□□□□□ -0.9
HMG20A-209ENST00000559728 GALCP54803 685 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 RPL7AP62424 266 aaKnown RBP9.44□□□□□ -0.9
HMG20A-209ENST00000559728 ZNF252P-AS1Q0IIN9 211 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 EFEMP1Q12805 493 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 CCDC14Q49A88 953 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 C10orf120Q5SQS8 335 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 SH3PXD2AQ5TCZ1 1133 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 ALKBH5Q6P6C2 394 aaKnown RBP9.44□□□□□ -0.9
HMG20A-209ENST00000559728 MTSS1LQ765P7 747 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 MIB1Q86YT6 1006 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 MFSD6LQ8IWD5 586 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 ARFGAP1Q8N6T3 406 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 CELF5Q8N6W0 485 aaKnown RBP9.44□□□□□ -0.9
HMG20A-209ENST00000559728 ADAM32Q8TC27 787 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 BPIFB1Q8TDL5 484 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 NXPE3Q969Y0 559 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 FAM149B1Q96BN6 582 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 CHFRQ96EP1 664 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 FCRL2Q96LA5 508 aaPredicted RBP9.44□□□□□ -0.9
HMG20A-209ENST00000559728 FAM83CQ9BQN1 747 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.44□□□□□ -0.9
HMG20A-209ENST00000559728 LINC00597Q9H2U6 94 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 ZFP14Q9HCL3 533 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 METTL5Q9NRN9 209 aaKnown RBP9.44□□□□□ -0.9
HMG20A-209ENST00000559728 MARCH2Q9P0N8 246 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 IGSF9Q9P2J2 1179 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 WDR35Q9P2L0 1181 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 RABGEF1Q9UJ41 708 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 RASAL2Q9UJF2 1139 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 DNMT3LQ9UJW3 386 aa9.44□□□□□ -0.9
HMG20A-209ENST00000559728 SLC12A8A0AV02 714 aa9.43□□□□□ -0.9
HMG20A-209ENST00000559728 RCCD1A6NED2 376 aa9.43□□□□□ -0.9
HMG20A-209ENST00000559728 TMEM191CA6NGB0 347 aa9.43□□□□□ -0.9
HMG20A-209ENST00000559728 SCAMP3O14828 347 aaKnown RBP9.43□□□□□ -0.9
HMG20A-209ENST00000559728 IRAK2O43187 625 aa9.43□□□□□ -0.9
HMG20A-209ENST00000559728 ENDOD1O94919 500 aa9.43□□□□□ -0.9
HMG20A-209ENST00000559728 TRUB2O95900 331 aaKnown RBP9.43□□□□□ -0.9
HMG20A-209ENST00000559728 CYP1A2P05177 515 aa9.43□□□□□ -0.9
HMG20A-209ENST00000559728 NOS2P35228 1153 aa9.43□□□□□ -0.9
HMG20A-209ENST00000559728 SNX16P57768 344 aa9.43□□□□□ -0.9
HMG20A-209ENST00000559728 RNASE9P60153 205 aaKnown RBP9.43□□□□□ -0.9
HMG20A-209ENST00000559728 GPC5P78333 572 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms