RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SART1O43290 800 aaKnown RBP8.56□□□□□ -1.04
SNX1-207ENST00000559401 GREM1O60565 184 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 APBB3O95704 486 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 PNMA6AP0CW24 399 aaPredicted RBP8.56□□□□□ -1.04
SNX1-207ENST00000559401 NCAM1P13591 858 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 CNR2P34972 360 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 CHKAP35790 457 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 GPD2P43304 727 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 ACADSBP45954 432 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 HARS2P49590 506 aaKnown RBP8.56□□□□□ -1.04
SNX1-207ENST00000559401 DGKGP49619 791 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 DGKEP52429 567 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 MRPS21P82921 87 aaKnown RBP8.56□□□□□ -1.04
SNX1-207ENST00000559401 PTK2Q05397 1052 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 MESP2Q0VG99 397 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 TCP11X2Q5H9J9 407 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 MIIPQ5JXC2 388 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 ANO7Q6IWH7 933 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 Q6ZNB5 142 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 C11orf57Q6ZUT1 292 aaPredicted RBP8.56□□□□□ -1.04
SNX1-207ENST00000559401 SYT13Q7L8C5 426 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 WDR5BQ86VZ2 330 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 SCUBE3Q8IX30 993 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 ETFBKMTQ8IXQ9 262 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 KIAA2013Q8IYS2 634 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 PGBD3Q8N328 593 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 DCLK2Q8N568 766 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 CAMKK1Q8N5S9 505 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 ALLCQ8N6M5 410 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 ZNF513Q8N8E2 541 aaPredicted RBP8.56□□□□□ -1.04
SNX1-207ENST00000559401 TERB1Q8NA31 727 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 SUMF1Q8NBK3 374 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 ANKRD20A12PQ8NF67 263 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 ENOX1Q8TC92 643 aaKnown RBP8.56□□□□□ -1.04
SNX1-207ENST00000559401 DDI1Q8WTU0 396 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 ZNF606Q8WXB4 792 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 IRGQQ8WZA9 623 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 SHC3Q92529 594 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 HSFY1Q96LI6 401 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 PCMTD1Q96MG8 357 aaPredicted RBP8.56□□□□□ -1.04
SNX1-207ENST00000559401 LSM14BQ9BX40 385 aaKnown RBP8.56□□□□□ -1.04
SNX1-207ENST00000559401 TPSD1Q9BZJ3 242 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 VPS16Q9H269 839 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 SIX2Q9NPC8 291 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 BCCIPQ9P287 314 aaKnown RBP eCLIP8.56□□□□□ -1.04
SNX1-207ENST00000559401 AJAP1Q9UKB5 411 aaPredicted RBP8.56□□□□□ -1.04
SNX1-207ENST00000559401 AGO1Q9UL18 857 aaKnown RBP8.56□□□□□ -1.04
SNX1-207ENST00000559401 MMP17Q9ULZ9 603 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 HBS1LQ9Y450 684 aaKnown RBP8.56□□□□□ -1.04
SNX1-207ENST00000559401 CEP83Q9Y592 693 aa8.56□□□□□ -1.04
SNX1-207ENST00000559401 FAM170AA1A519 330 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 E5RJQ4 531 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 HRO43593 1189 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 CACNG3O60359 315 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 TSPAN3O60637 253 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 RPP40O75818 363 aaKnown RBP8.55□□□□□ -1.04
SNX1-207ENST00000559401 GABBR2O75899 941 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 ALDH1A2O94788 518 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 KLKB1P03952 638 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 CDK11BP21127 795 aaKnown RBP8.55□□□□□ -1.04
SNX1-207ENST00000559401 HOXA6P31267 233 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 GBP1P32455 592 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 KRT9P35527 623 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 WASP42768 502 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 TNFRSF4P43489 277 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 TBX4P57082 545 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 MYL5Q02045 173 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 KRT31Q15323 416 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 MEA1Q16626 185 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 EOGTQ5NDL2 527 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 FKBP15Q5T1M5 1219 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 EMC10Q5UCC4 262 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 LAIR1Q6GTX8 287 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 SDE2Q6IQ49 451 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 RBM43Q6ZSC3 357 aaKnown RBP8.55□□□□□ -1.04
SNX1-207ENST00000559401 TOGARAM2Q6ZUX3 1019 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 TRMT11Q7Z4G4 463 aaKnown RBP8.55□□□□□ -1.04
SNX1-207ENST00000559401 SCML4Q8N228 414 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 IL17RCQ8NAC3 791 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 TXNDC5Q8NBS9 432 aaKnown RBP8.55□□□□□ -1.04
SNX1-207ENST00000559401 GAB3Q8WWW8 586 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 ERLEC1Q96DZ1 483 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 NOX5Q96PH1 765 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 TRIM62Q9BVG3 475 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 SYNCQ9H7C4 482 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 POLMQ9NP87 494 aaPredicted RBP8.55□□□□□ -1.04
SNX1-207ENST00000559401 FANCLQ9NW38 375 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 MARK1Q9P0L2 795 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 USP18Q9UMW8 372 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 FHOD1Q9Y613 1164 aa8.55□□□□□ -1.04
SNX1-207ENST00000559401 RALGAPA1Q6GYQ0 2036 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 FAM186AA6NE01 2351 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 SYNJ2BP-COX16A0A087WUM0 186 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 TCRBV21S2A2A0A5A6 115 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 SGK1O00141 431 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 FOXN3O00409 490 aaPredicted RBP8.54□□□□□ -1.04
SNX1-207ENST00000559401 ZBTB24O43167 697 aaPredicted RBP8.54□□□□□ -1.04
SNX1-207ENST00000559401 MOCS2O96007 188 aaPredicted RBP8.54□□□□□ -1.04
SNX1-207ENST00000559401 KIR2DL1P43626 348 aaPredicted RBP8.54□□□□□ -1.04
SNX1-207ENST00000559401 SLC11A2P49281 568 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms