RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 LGSNQ5TDP6 509 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 RGS9BPQ6ZS82 235 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 CLEC20AQ6ZU45 233 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 PDZD4Q76G19 769 aaPredicted RBP11.7□□□□□ -0.54
CLPX-204ENST00000559152 TAB3Q8N5C8 712 aaPredicted RBP11.7□□□□□ -0.54
CLPX-204ENST00000559152 GBP7Q8N8V2 638 aaPredicted RBP11.7□□□□□ -0.54
CLPX-204ENST00000559152 GDAP1Q8TB36 358 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 DENND1AQ8TEH3 1009 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 TFB1MQ8WVM0 346 aaKnown RBP11.7□□□□□ -0.54
CLPX-204ENST00000559152 CCT6BQ92526 530 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 APBB2Q92870 758 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 GAD1Q99259 594 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 NPY6RQ99463 290 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 SYT15Q9BQS2 421 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 MTMR10Q9NXD2 777 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 CHMP2BQ9UQN3 213 aa11.7□□□□□ -0.54
CLPX-204ENST00000559152 ARHGEF37A1IGU5 675 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 ARL5CA6NH57 179 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 ATP2C2O75185 946 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 BANF1O75531 89 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 CHRNA1P02708 482 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 GSTA1P08263 222 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 CA4P22748 312 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 TKTL1P51854 596 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 CDK16Q00536 496 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 TRIP11Q15643 1979 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 TTC31Q49AM3 519 aaPredicted RBP11.69□□□□□ -0.54
CLPX-204ENST00000559152 PAQR9Q6ZVX9 377 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 BNIPLQ7Z465 357 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 CCDC185Q8N715 623 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 GSTCDQ8NEC7 633 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 WNT8BQ93098 351 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 PGBD4Q96DM1 585 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 OSBPL7Q9BZF2 842 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 XAB2Q9HCS7 855 aaKnown RBP11.69□□□□□ -0.54
CLPX-204ENST00000559152 FGFR1OP2Q9NVK5 253 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 CAPN7Q9Y6W3 813 aa11.69□□□□□ -0.54
CLPX-204ENST00000559152 C9IYK1 514 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 M0QYT0 321 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 KIF3CO14782 793 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 CAPN9O14815 690 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 TM9SF1O15321 606 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 TYROBPO43914 113 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 ALDH1A1P00352 501 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 OAS1P00973 400 aaKnown RBP11.68□□□□□ -0.54
CLPX-204ENST00000559152 APRTP07741 180 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 INHBAP08476 426 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 KRT4P19013 534 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 ACAT1P24752 427 aaKnown RBP11.68□□□□□ -0.54
CLPX-204ENST00000559152 FDFT1P37268 417 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 CLCNKBP51801 687 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 ZNF135P52742 658 aaPredicted RBP11.68□□□□□ -0.54
CLPX-204ENST00000559152 MAP3K7CLP57077 242 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 YWHAGP61981 247 aaKnown RBP eCLIP11.68□□□□□ -0.54
CLPX-204ENST00000559152 GBE1Q04446 702 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 DEUP1Q05D60 604 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 MGAT3Q09327 533 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 HHATQ5VTY9 493 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 NCBP2-AS2Q69YL0 99 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 KCNT2Q6UVM3 1135 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 SPATA21Q7Z572 469 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 METTL23Q86XA0 190 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 FAM131BQ86XD5 332 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 HTR3CQ8WXA8 447 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 PAIP2Q9BPZ3 127 aaKnown RBP11.68□□□□□ -0.54
CLPX-204ENST00000559152 PITPNM3Q9BZ71 974 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 ETNK1Q9HBU6 452 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 KRT82Q9NSB4 513 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 DSEQ9UL01 958 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 ARL2BPQ9Y2Y0 163 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 RAD54BQ9Y620 910 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 TCRBV9S1A1TA0A576 114 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 FOXO6A8MYZ6 492 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 KBTBD13C9JR72 458 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 CLDN5O00501 218 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 SPAG7O75391 227 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 AP1G2O75843 785 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 DGKIO75912 1065 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 PGK1P00558 417 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 F9P00740 461 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 ODC1P11926 461 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 ATXN1P54253 815 aaKnown RBP11.68□□□□□ -0.54
CLPX-204ENST00000559152 PDK1Q15118 436 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 MTFR1Q15390 333 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 TRPM8Q7Z2W7 1104 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 CCDC110Q8TBZ0 833 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 DCAKDQ8WVC6 231 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 SLC44A1Q8WWI5 657 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 TRIB2Q92519 343 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 NTAN1Q96AB6 310 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 SMARCD1Q96GM5 515 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 OLFM3Q96PB7 478 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 WDR83Q9BRX9 315 aaKnown RBP11.68□□□□□ -0.54
CLPX-204ENST00000559152 TRIM62Q9BVG3 475 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 MLXIPLQ9NP71 852 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 CRTAC1Q9NQ79 661 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 DTLQ9NZJ0 730 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 ZC3H7BQ9UGR2 993 aaKnown RBP11.68□□□□□ -0.54
CLPX-204ENST00000559152 USP3Q9Y6I4 520 aa11.68□□□□□ -0.54
CLPX-204ENST00000559152 TLL2Q9Y6L7 1015 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms