RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 CD93Q9NPY3 652 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 KRT82Q9NSB4 513 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 SMPD4Q9NXE4 827 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 PCDHA5Q9Y5H7 936 aa11.85□□□□□ -0.51
CHRNA3-205ENST00000559080 PSMA7O14818 248 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 SLC16A3O15427 465 aaKnown RBP11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 AP1G2O75843 785 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 RTN3O95197 1032 aaPredicted RBP11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 ABL1P00519 1130 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 SYPP08247 313 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 GTF2H1P32780 548 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 LRRC63Q05C16 580 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 PPP3CAQ08209 521 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 TAF10Q12962 218 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 ORC1Q13415 861 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 DCAF17Q5H9S7 520 aaPredicted RBP11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 TCERG1LQ5VWI1 586 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 KRT39Q6A163 491 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 TOGARAM2Q6ZUX3 1019 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 GLRX5Q86SX6 157 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 NAXDQ8IW45 347 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 NUP93Q8N1F7 819 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 ZNF513Q8N8E2 541 aaPredicted RBP11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 TRIML1Q8N9V2 468 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 PDZD8Q8NEN9 1154 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 KCNV2Q8TDN2 545 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 ERCC4Q92889 916 aaPredicted RBP11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 FBXO32Q969P5 355 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 EEF2KMTQ96G04 330 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 ZNF419Q96HQ0 510 aaPredicted RBP11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 ZFRQ96KR1 1074 aaKnown RBP11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 HSPA12BQ96MM6 686 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 CYP3A43Q9HB55 503 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 SCUBE2Q9NQ36 999 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 TMEM30AQ9NV96 361 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 CACNA2D2Q9NY47 1150 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 CFAP97Q9P2B7 532 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 DKK4Q9UBT3 224 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 HMGXB4Q9UGU5 601 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 RAXQ9Y2V3 346 aa11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 MUC22E2RYF6 1773 aaPredicted RBP11.84□□□□□ -0.51
CHRNA3-205ENST00000559080 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 TRIM24O15164 1050 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 TULP3O75386 442 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 ADH1CP00326 375 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 FAM200BP0CF97 657 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 CCDC130P13994 396 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 HOXB2P14652 356 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 CD58P19256 250 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 NDUFV2P19404 249 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 YWHAQP27348 245 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 PPP1R2P41236 205 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 WASP42768 502 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 SLC5A3P53794 718 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 FKBP3Q00688 224 aaKnown RBP11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 GAD2Q05329 585 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 INCA1Q0VD86 236 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 PLEKHG6Q3KR16 790 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 FUKQ8N0W3 1084 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 NAT16Q8N8M0 369 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 TERB1Q8NA31 727 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 FBXL13Q8NEE6 735 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 SPATA20Q8TB22 786 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 SLC2A14Q8TDB8 520 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 OVCA2Q8WZ82 227 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 LRIG1Q96JA1 1093 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 ACOX2Q99424 681 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 NT5C1AQ9BXI3 368 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 FAM49BQ9NUQ9 324 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 TOR4AQ9NXH8 423 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 KIAA1522Q9P206 1035 aaPredicted RBP11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 PCOLCE2Q9UKZ9 415 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 STARD13Q9Y3M8 1113 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 PCDHB9Q9Y5E1 797 aa11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 ASH1LQ9NR48 2969 aaKnown RBP11.83□□□□□ -0.52
CHRNA3-205ENST00000559080 PTPRQQ9UMZ3 2332 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 E2F8A0AVK6 867 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 TBC1D3BA6NDS4 549 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 HOXC11O43248 304 aaPredicted RBP11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 ZNF217O75362 1048 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 DKK1O94907 266 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 MAOBP27338 520 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 ADORA2BP29275 332 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 NTSR1P30989 418 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 GRIK2Q13002 908 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 TMPRSS7Q7RTY8 843 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 DDX42Q86XP3 938 aaKnown RBP eCLIP11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 ELOA2Q8IYF1 753 aaPredicted RBP11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 CRYBG2Q8N1P7 616 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 TTC39CQ8N584 583 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 BAHD1Q8TBE0 780 aaPredicted RBP11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 ADAM32Q8TC27 787 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 WBP2Q969T9 261 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 CRELD1Q96HD1 420 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 KCNK16Q96T55 309 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 APOBEC3GQ9HC16 384 aaKnown RBP11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 TBC1D14Q9P2M4 693 aa11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 ARMCX3Q9UH62 379 aaPredicted RBP11.82□□□□□ -0.52
CHRNA3-205ENST00000559080 CYP8B1Q9UNU6 501 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms