RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 NDRG1Q92597 394 aaKnown RBP17.83■□□□□ 0.44
LRRC28-210ENST00000558879 KREMEN1Q96MU8 473 aa17.83■□□□□ 0.44
LRRC28-210ENST00000558879 XPO6Q96QU8 1125 aaKnown RBP17.83■□□□□ 0.44
LRRC28-210ENST00000558879 DCLK3Q9C098 648 aa17.83■□□□□ 0.44
LRRC28-210ENST00000558879 LRRC4Q9HBW1 653 aa17.83■□□□□ 0.44
LRRC28-210ENST00000558879 ZDHHC4Q9NPG8 344 aa17.83■□□□□ 0.44
LRRC28-210ENST00000558879 OLA1Q9NTK5 396 aaKnown RBP17.83■□□□□ 0.44
LRRC28-210ENST00000558879 MARCH2Q9P0N8 246 aa17.83■□□□□ 0.44
LRRC28-210ENST00000558879 RWDD2AQ9UIY3 292 aa17.83■□□□□ 0.44
LRRC28-210ENST00000558879 FBXO10Q9UK96 956 aa17.83■□□□□ 0.44
LRRC28-210ENST00000558879 PCDHB4Q9Y5E5 795 aa17.83■□□□□ 0.44
LRRC28-210ENST00000558879 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.83■□□□□ 0.44
LRRC28-210ENST00000558879 TBC1D3BA6NDS4 549 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 YJEFN3A6XGL0 299 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 E7ENQ6 273 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 FOXD2O60548 495 aaPredicted RBP17.82■□□□□ 0.44
LRRC28-210ENST00000558879 GABBR2O75899 941 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 CISD3P0C7P0 127 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 BRD2P25440 801 aaKnown RBP17.82■□□□□ 0.44
LRRC28-210ENST00000558879 CORO1AP31146 461 aaKnown RBP17.82■□□□□ 0.44
LRRC28-210ENST00000558879 DAOAP59103 153 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 STILQ15468 1287 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 CNGA2Q16280 664 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 PMS2CLQ68D20 193 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 TOGARAM2Q6ZUX3 1019 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 DGLUCYQ7Z3D6 616 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 TRMT11Q7Z4G4 463 aaKnown RBP17.82■□□□□ 0.44
LRRC28-210ENST00000558879 CPXM2Q8N436 756 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 NETO1Q8TDF5 533 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 PLD4Q96BZ4 506 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 INTS2Q9H0H0 1204 aaKnown RBP17.82■□□□□ 0.44
LRRC28-210ENST00000558879 ARRDC1-AS1Q9H2J1 176 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 CD248Q9HCU0 757 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 CNGB3Q9NQW8 809 aa17.82■□□□□ 0.44
LRRC28-210ENST00000558879 CDV3Q9UKY7 258 aaKnown RBP17.82■□□□□ 0.44
LRRC28-210ENST00000558879 PRRT4C9JH25 899 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 DCLK1O15075 740 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 FGFR1OPO95684 399 aaKnown RBP17.81■□□□□ 0.44
LRRC28-210ENST00000558879 ZNF806P0C7X5 589 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 CHKAP35790 457 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 ATXN1P54253 815 aaKnown RBP17.81■□□□□ 0.44
LRRC28-210ENST00000558879 TRIP4Q15650 581 aaPredicted RBP17.81■□□□□ 0.44
LRRC28-210ENST00000558879 CAMK4Q16566 473 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 FYB2Q5VWT5 728 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 EGFLAMQ63HQ2 1017 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 PMF1Q6P1K2 205 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 MSANTD2Q6P1R3 559 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 NUDT18Q6ZVK8 323 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 RSRC2Q7L4I2 434 aaKnown RBP17.81■□□□□ 0.44
LRRC28-210ENST00000558879 RRAGAQ7L523 313 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 C11orf74Q86VG3 221 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 RTKNQ9BST9 563 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 POLMQ9NP87 494 aaPredicted RBP17.81■□□□□ 0.44
LRRC28-210ENST00000558879 AGO1Q9UL18 857 aaKnown RBP17.81■□□□□ 0.44
LRRC28-210ENST00000558879 STRIP2Q9ULQ0 834 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 LAMA1P25391 3075 aa17.81■□□□□ 0.44
LRRC28-210ENST00000558879 TP53BP1Q12888 1972 aaPredicted RBP17.8■□□□□ 0.44
LRRC28-210ENST00000558879 PCDH15Q96QU1 1955 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 SLC12A8A0AV02 714 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 M0QYV0 167 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 ALDH1A2O94788 518 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 CALCAP01258 141 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 HMBSP08397 361 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 BCKDHBP21953 392 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 MPLP40238 635 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 P2RY2P41231 377 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 RPL34P49207 117 aaKnown RBP17.8■□□□□ 0.44
LRRC28-210ENST00000558879 DGKGP49619 791 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 ELF2Q15723 593 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 MEA1Q16626 185 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 USP39Q53GS9 565 aaKnown RBP17.8■□□□□ 0.44
LRRC28-210ENST00000558879 BSPRYQ5W0U4 402 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 SIX6OS1Q8N1H7 587 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 IRGQQ8WZA9 623 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 IPO9Q96P70 1041 aaKnown RBP17.8■□□□□ 0.44
LRRC28-210ENST00000558879 ABCC13Q9NSE7 274 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 PLK2Q9NYY3 685 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 SLC27A6Q9Y2P4 619 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 HBS1LQ9Y450 684 aaKnown RBP17.8■□□□□ 0.44
LRRC28-210ENST00000558879 GON4LQ3T8J9 2241 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 SPTBN2O15020 2390 aa17.8■□□□□ 0.44
LRRC28-210ENST00000558879 TCRBV21S2A2A0A5A6 115 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 MED19A0JLT2 244 aaPredicted RBP17.79■□□□□ 0.44
LRRC28-210ENST00000558879 GFRA2O00451 464 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 SLC30A4O14863 429 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 GDF9O60383 454 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 RHOBTB1O94844 696 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 HOXB2P14652 356 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 NTSR1P30989 418 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 LIMK1P53667 647 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 TRIM65Q6PJ69 517 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 IRF2BP1Q8IU81 584 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 DENND1CQ8IV53 801 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 FMNL3Q8IVF7 1028 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 BHMTQ93088 406 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 ACOX2Q99424 681 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 GABRG3Q99928 467 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 CLSTN2Q9H4D0 955 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 STOML2Q9UJZ1 356 aa17.79■□□□□ 0.44
LRRC28-210ENST00000558879 CNOT1A5YKK6 2376 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms