RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 KRTAP1-3Q8IUG1 177 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 IL31RAQ8NI17 732 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 ARL8AQ96BM9 186 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 ZNF333Q96JL9 665 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 OR14A2Q96R54 314 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 TAAR1Q96RJ0 339 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 B3GNT5Q9BYG0 378 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 KCNH6Q9H252 994 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 EPC1Q9H2F5 836 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 SH3GLB2Q9NR46 395 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 PPP4R1LQ9P1A2 415 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 VPS54Q9P1Q0 977 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 ORC3Q9UBD5 711 aaPredicted RBP6.75□□□□□ -1.33
LRRC28-209ENST00000558861 SEC63Q9UGP8 760 aaKnown RBP6.75□□□□□ -1.33
LRRC28-209ENST00000558861 STXBP5LQ9Y2K9 1186 aa6.75□□□□□ -1.33
LRRC28-209ENST00000558861 ZNFX1Q9P2E3 1918 aaKnown RBP6.74□□□□□ -1.33
LRRC28-209ENST00000558861 TNRC18O15417 2968 aaPredicted RBP6.74□□□□□ -1.33
LRRC28-209ENST00000558861 LRRC37A2A6NM11 1700 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 CCDC194A0A1B0GVG4 234 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 GCOM1H8Y6P7 765 aaPredicted RBP6.74□□□□□ -1.33
LRRC28-209ENST00000558861 CPLX1O14810 134 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 CAND2O75155 1236 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 CDKL5O76039 1030 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 KRT18P05783 430 aaKnown RBP6.74□□□□□ -1.33
LRRC28-209ENST00000558861 POLR2MP0CAP2 368 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 RAP2AP10114 183 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 CALML3P27482 149 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 ALDH5A1P51649 535 aaPredicted RBP6.74□□□□□ -1.33
LRRC28-209ENST00000558861 HK3P52790 923 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 SP140Q13342 867 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 RAB39AQ14964 217 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 ARHGEF6Q15052 776 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 UBE2SQ16763 222 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 CCDC157Q569K6 752 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 EARS2Q5JPH6 523 aaKnown RBP6.74□□□□□ -1.33
LRRC28-209ENST00000558861 THEMIS2Q5TEJ8 643 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 WDR78Q5VTH9 848 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 TAPT1Q6NXT6 567 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 FRMD5Q7Z6J6 570 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 ANKRD35Q8N283 1001 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 DCBLD1Q8N8Z6 715 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 C3orf20Q8ND61 904 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 DNERQ8NFT8 737 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 SLC35B2Q8TB61 432 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 CASKIN2Q8WXE0 1202 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 PSTPIP2Q9H939 334 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 ARNT2Q9HBZ2 717 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 PARD6AQ9NPB6 346 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 PXMP2Q9NR77 195 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 NRBP1Q9UHY1 535 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 PCDHA3Q9Y5H8 950 aa6.74□□□□□ -1.33
LRRC28-209ENST00000558861 SMCO2A6NFE2 343 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 FAM227AF5H4B4 570 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 TPP1O14773 563 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 SLC16A6O15403 523 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 HOXA3O43365 443 aaPredicted RBP6.73□□□□□ -1.33
LRRC28-209ENST00000558861 PRICKLE3O43900 615 aaPredicted RBP6.73□□□□□ -1.33
LRRC28-209ENST00000558861 MALP21145 153 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 NAPAP54920 295 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 CTXN1P60606 82 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 HMGN5P82970 282 aaKnown RBP6.73□□□□□ -1.33
LRRC28-209ENST00000558861 MAP9Q49MG5 647 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 UBXN11Q5T124 520 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 TMEM63BQ5T3F8 832 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 ANKS6Q68DC2 871 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 CCSAPQ6IQ19 270 aaPredicted RBP6.73□□□□□ -1.33
LRRC28-209ENST00000558861 CPLX2Q6PUV4 134 aaKnown RBP6.73□□□□□ -1.33
LRRC28-209ENST00000558861 FAM111BQ6SJ93 734 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 NPNTQ6UXI9 565 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 ARMCX2Q7L311 632 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 CHST15Q7LFX5 561 aaPredicted RBP6.73□□□□□ -1.33
LRRC28-209ENST00000558861 DPP9Q86TI2 863 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 CCAR1Q8IX12 1150 aaKnown RBP6.73□□□□□ -1.33
LRRC28-209ENST00000558861 GIMAP8Q8ND71 665 aaPredicted RBP6.73□□□□□ -1.33
LRRC28-209ENST00000558861 RAET1EQ8TD07 263 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 LENG9Q96B70 501 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 INPP4AQ96PE3 977 aaPredicted RBP6.73□□□□□ -1.33
LRRC28-209ENST00000558861 RMDN3Q96TC7 470 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 MYOCQ99972 504 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 TMEM60Q9H2L4 133 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 NELFAQ9H3P2 528 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 FAM204AQ9H8W3 233 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 MSL2Q9HCI7 577 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 LMBRD1Q9NUN5 540 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 KCNJ14Q9UNX9 436 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 MYH6P13533 1939 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 PDE4DIPQ5VU43 2346 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 MCM3APO60318 1980 aa6.73□□□□□ -1.33
LRRC28-209ENST00000558861 RBBP6Q7Z6E9 1792 aaKnown RBP6.72□□□□□ -1.33
LRRC28-209ENST00000558861 IGLV3-22A0A075B6J6 115 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 CXorf49A8MYA2 514 aaPredicted RBP6.72□□□□□ -1.33
LRRC28-209ENST00000558861 CTAGE5O15320 804 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 ARIH2O95376 493 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 PLATP00750 562 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 MMP1P03956 469 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 CD1AP06126 327 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 CYP3A4P08684 503 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 RHCEP18577 417 aa6.72□□□□□ -1.33
LRRC28-209ENST00000558861 CCND3P30281 292 aaPredicted RBP6.72□□□□□ -1.33
LRRC28-209ENST00000558861 CIITAP33076 1130 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms