RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 NENFQ9UMX5 172 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 SH3BP1Q9Y3L3 701 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 MIA3Q5JRA6 1907 aa18.21■□□□□ 0.51
TPM1-214ENST00000558544 ABCB4P21439 1286 aa18.2■□□□□ 0.5
TPM1-214ENST00000558544 NOS2P35228 1153 aa18.2■□□□□ 0.5
TPM1-214ENST00000558544 FLT3P36888 993 aa18.2■□□□□ 0.5
TPM1-214ENST00000558544 CC2D1AQ6P1N0 951 aaPredicted RBP18.2■□□□□ 0.5
TPM1-214ENST00000558544 EMC1Q8N766 993 aa18.2■□□□□ 0.5
TPM1-214ENST00000558544 JOSD2Q8TAC2 188 aa18.2■□□□□ 0.5
TPM1-214ENST00000558544 ASIC4Q96FT7 647 aa18.2■□□□□ 0.5
TPM1-214ENST00000558544 SERPINB11Q96P15 392 aa18.2■□□□□ 0.5
TPM1-214ENST00000558544 BRD9Q9H8M2 597 aa18.2■□□□□ 0.5
TPM1-214ENST00000558544 FAM204AQ9H8W3 233 aa18.2■□□□□ 0.5
TPM1-214ENST00000558544 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.2■□□□□ 0.5
TPM1-214ENST00000558544 DUSP12Q9UNI6 340 aa18.2■□□□□ 0.5
TPM1-214ENST00000558544 TTC28Q96AY4 2481 aa18.2■□□□□ 0.5
TPM1-214ENST00000558544 TCRBV5S1A1TA0A578 114 aa18.19■□□□□ 0.5
TPM1-214ENST00000558544 STC2O76061 302 aa18.19■□□□□ 0.5
TPM1-214ENST00000558544 TRUB2O95900 331 aaKnown RBP18.19■□□□□ 0.5
TPM1-214ENST00000558544 KRT3P12035 628 aa18.19■□□□□ 0.5
TPM1-214ENST00000558544 MATKP42679 507 aa18.19■□□□□ 0.5
TPM1-214ENST00000558544 COG7P83436 770 aa18.19■□□□□ 0.5
TPM1-214ENST00000558544 ARHGAP29Q52LW3 1261 aa18.19■□□□□ 0.5
TPM1-214ENST00000558544 TRIM68Q6AZZ1 485 aa18.19■□□□□ 0.5
TPM1-214ENST00000558544 TRNP1Q6NT89 227 aa18.19■□□□□ 0.5
TPM1-214ENST00000558544 TRIM11Q96F44 468 aa18.19■□□□□ 0.5
TPM1-214ENST00000558544 THG1LQ9NWX6 298 aaKnown RBP18.19■□□□□ 0.5
TPM1-214ENST00000558544 CNOT8Q9UFF9 292 aaKnown RBP18.19■□□□□ 0.5
TPM1-214ENST00000558544 LSM7Q9UK45 103 aaKnown RBP18.19■□□□□ 0.5
TPM1-214ENST00000558544 HBS1LQ9Y450 684 aaKnown RBP18.19■□□□□ 0.5
TPM1-214ENST00000558544 WNT6Q9Y6F9 365 aa18.19■□□□□ 0.5
TPM1-214ENST00000558544 SYNJ2BP-COX16A0A087WUM0 186 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 ZNF263O14978 683 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 CHADO15335 359 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 SRFP11831 508 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 FECHP22830 423 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 IFNAR2P48551 515 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 SULT1E1P49888 294 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 TBX4P57082 545 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 GPC5P78333 572 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 TRIP4Q15650 581 aaPredicted RBP18.18■□□□□ 0.5
TPM1-214ENST00000558544 OTUD1Q5VV17 481 aaPredicted RBP18.18■□□□□ 0.5
TPM1-214ENST00000558544 OSCP1Q8WVF1 389 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 PLD4Q96BZ4 506 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 CFAP57Q96MR6 1250 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 MCEEQ96PE7 176 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 DUS2Q9NX74 493 aaKnown RBP18.18■□□□□ 0.5
TPM1-214ENST00000558544 COX16Q9P0S2 106 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 MYO1AQ9UBC5 1043 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 STAP1Q9ULZ2 295 aa18.18■□□□□ 0.5
TPM1-214ENST00000558544 E2F8A0AVK6 867 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 SOWAHDA6NJG2 315 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 SIGLEC16A6NMB1 481 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 IRAK2O43187 625 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 GREM1O60565 184 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 IGLV3-25P01717 112 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 MYBL1P10243 752 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 TFE3P19532 575 aaPredicted RBP18.17■□□□□ 0.5
TPM1-214ENST00000558544 PPP1R15BQ5SWA1 713 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 PLEKHA7Q6IQ23 1121 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 ARCQ7LC44 396 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 BBS7Q8IWZ6 715 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 RXFP2Q8WXD0 754 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 TBCBQ99426 244 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 NPY6RQ99463 290 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 DDX23Q9BUQ8 820 aaKnown RBP18.17■□□□□ 0.5
TPM1-214ENST00000558544 PACSIN1Q9BY11 444 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 ADAM33Q9BZ11 813 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 THAP2Q9H0W7 228 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 PARVAQ9NVD7 372 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 DDIT4Q9NX09 232 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 CALCOCO1Q9P1Z2 691 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 C2CD4BA6NLJ0 364 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 M0QYT0 321 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 CORO1AP31146 461 aaKnown RBP18.17■□□□□ 0.5
TPM1-214ENST00000558544 RFC1P35251 1148 aaPredicted RBP18.17■□□□□ 0.5
TPM1-214ENST00000558544 KPNA1P52294 538 aaPredicted RBP18.17■□□□□ 0.5
TPM1-214ENST00000558544 GALCP54803 685 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 GSDMDP57764 484 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 RPL7AP62424 266 aaKnown RBP18.17■□□□□ 0.5
TPM1-214ENST00000558544 TNK2Q07912 1038 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 NME3Q13232 169 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 NNTQ13423 1086 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 MAMLD1Q13495 774 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 EML3Q32P44 896 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 DCUN1D2Q6PH85 259 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 HTR3DQ70Z44 454 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 TMTC1Q8IUR5 882 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 IRF7Q92985 503 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 BAG1Q99933 345 aaPredicted RBP18.17■□□□□ 0.5
TPM1-214ENST00000558544 FAM83CQ9BQN1 747 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 COL25A1Q9BXS0 654 aaPredicted RBP18.17■□□□□ 0.5
TPM1-214ENST00000558544 LINC00597Q9H2U6 94 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 EBF3Q9H4W6 596 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 SLC2A4RGQ9NR83 387 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 RRN3Q9NYV6 651 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 TLR6Q9Y2C9 796 aa18.17■□□□□ 0.5
TPM1-214ENST00000558544 ANKRD62A6NC57 917 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 ARNTLO00327 626 aa18.16■□□□□ 0.5
TPM1-214ENST00000558544 IGLV3-27P01718 113 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms