RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 FAM204AQ9H8W3 233 aa15.49■□□□□ 0.07
VPS18-202ENST00000558474 WDR6Q9NNW5 1121 aaKnown RBP15.49■□□□□ 0.07
VPS18-202ENST00000558474 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.49■□□□□ 0.07
VPS18-202ENST00000558474 DDIT4Q9NX09 232 aa15.49■□□□□ 0.07
VPS18-202ENST00000558474 DNMT3LQ9UJW3 386 aa15.49■□□□□ 0.07
VPS18-202ENST00000558474 CDC23Q9UJX2 597 aa15.49■□□□□ 0.07
VPS18-202ENST00000558474 PACSIN2Q9UNF0 486 aaPredicted RBP15.49■□□□□ 0.07
VPS18-202ENST00000558474 HBS1LQ9Y450 684 aaKnown RBP15.49■□□□□ 0.07
VPS18-202ENST00000558474 ZNF487B1APH4 448 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 RFXAPO00287 272 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 ZNF197O14709 1029 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 CCL16O15467 120 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 TADA3O75528 432 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 URI1O94763 535 aaPredicted RBP15.48■□□□□ 0.07
VPS18-202ENST00000558474 ZRANB2O95218 330 aaKnown RBP eCLIP15.48■□□□□ 0.07
VPS18-202ENST00000558474 OAS1P00973 400 aaKnown RBP15.48■□□□□ 0.07
VPS18-202ENST00000558474 CCR1P32246 355 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 PGFP49763 221 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 PDK2Q15119 407 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 TRIP4Q15650 581 aaPredicted RBP15.48■□□□□ 0.07
VPS18-202ENST00000558474 ODF2Q5BJF6 829 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 TMEM150AQ86TG1 271 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 MAP7D3Q8IWC1 876 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 FAM71BQ8TC56 605 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 MRPS31Q92665 395 aaKnown RBP15.48■□□□□ 0.07
VPS18-202ENST00000558474 ALG3Q92685 438 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 KRT35Q92764 455 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 NAP1L3Q99457 506 aaPredicted RBP15.48■□□□□ 0.07
VPS18-202ENST00000558474 ADAM33Q9BZ11 813 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 WDCPQ9H6R7 721 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 PRDM16Q9HAZ2 1276 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 ZNF334Q9HCZ1 680 aaPredicted RBP15.48■□□□□ 0.07
VPS18-202ENST00000558474 RRAGDQ9NQL2 400 aaPredicted RBP15.48■□□□□ 0.07
VPS18-202ENST00000558474 PIGVQ9NUD9 493 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.48■□□□□ 0.07
VPS18-202ENST00000558474 MARCH2Q9P0N8 246 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 EFR3BQ9Y2G0 817 aa15.48■□□□□ 0.07
VPS18-202ENST00000558474 CCDC195A0A1B0GUA6 201 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 SPDYE4A6NLX3 237 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 RFPL2O75678 378 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 OLFM2O95897 454 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 RARAP10276 462 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 HOXB8P17481 243 aaPredicted RBP15.47■□□□□ 0.07
VPS18-202ENST00000558474 TFE3P19532 575 aaPredicted RBP15.47■□□□□ 0.07
VPS18-202ENST00000558474 IL1R2P27930 398 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 GABRR2P28476 465 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 PTPN7P35236 360 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 ADRA1BP35368 520 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 PITX1P78337 314 aaPredicted RBP15.47■□□□□ 0.07
VPS18-202ENST00000558474 COG7P83436 770 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 HYAL1Q12794 435 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 NME3Q13232 169 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 WHAMMP3Q1A5X7 153 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 C10orf120Q5SQS8 335 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 SEL1L2Q5TEA6 688 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 GPR153Q6NV75 609 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 SCYL2Q6P3W7 929 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 CYP4V2Q6ZWL3 525 aaPredicted RBP15.47■□□□□ 0.07
VPS18-202ENST00000558474 CPNE8Q86YQ8 564 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 RASGEF1CQ8N431 466 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 ACTRT1Q8TDG2 376 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 SLC39A13Q96H72 371 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 HAPLN3Q96S86 360 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 CORO1BQ9BR76 489 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 ARHGEF38Q9NXL2 777 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 CALCOCO1Q9P1Z2 691 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 RCOR3Q9P2K3 495 aaPredicted RBP15.47■□□□□ 0.07
VPS18-202ENST00000558474 PCSK1NQ9UHG2 260 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 SLC12A6Q9UHW9 1150 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 FZD10Q9ULW2 581 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 MRFAP1Q9Y605 127 aa15.47■□□□□ 0.07
VPS18-202ENST00000558474 LAMA2P24043 3122 aaKnown RBP15.46■□□□□ 0.07
VPS18-202ENST00000558474 TRANK1O15050 2925 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 IGLV3-27P01718 113 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 TCF4P15884 667 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 HTR7P34969 479 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 PAFAH1B1P43034 410 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 TBX4P57082 545 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 CKAP4Q07065 602 aaKnown RBP15.46■□□□□ 0.07
VPS18-202ENST00000558474 EFEMP1Q12805 493 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 PPP2R5EQ16537 467 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 DPYSL2Q16555 572 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 ARHGAP15Q53QZ3 475 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 TCEAL5Q5H9L2 206 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 EFHC2Q5JST6 749 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 ZNF697Q5TEC3 545 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 DAB2IPQ5VWQ8 1189 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 NUGGCQ68CJ6 796 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 GAREM2Q75VX8 874 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 PDZD4Q76G19 769 aaPredicted RBP15.46■□□□□ 0.07
VPS18-202ENST00000558474 FAM131BQ86XD5 332 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 UNC45BQ8IWX7 931 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 MAIP1Q8WWC4 291 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 AZIN2Q96A70 460 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 PLD4Q96BZ4 506 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 ZNF707Q96C28 371 aaPredicted RBP15.46■□□□□ 0.07
VPS18-202ENST00000558474 PEBP4Q96S96 227 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 SNRNP25Q9BV90 132 aaKnown RBP15.46■□□□□ 0.07
VPS18-202ENST00000558474 OSBPL2Q9H1P3 480 aa15.46■□□□□ 0.07
VPS18-202ENST00000558474 TTYH1Q9H313 450 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms