RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 MAP7D3Q8IWC1 876 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 APOL6Q9BWW8 343 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 KLC2Q9H0B6 622 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 CDHR5Q9HBB8 845 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 COX16Q9P0S2 106 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 PTPRFP10586 1907 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 LYPLA1O75608 230 aaPredicted RBP13.35□□□□□ -0.27
LDLR-207ENST00000558013 NPTXRO95502 500 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 APOEP02649 317 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 ESRRAP11474 423 aaPredicted RBP13.35□□□□□ -0.27
LDLR-207ENST00000558013 L1CAMP32004 1257 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 ADCYAP1R1P41586 468 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 CCNG1P51959 295 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 RABGGTBP53611 331 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 SLC6A3Q01959 620 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 BOLA3Q53S33 107 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 CES3Q6UWW8 571 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 ADGRF2Q8IZF7 708 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 VPS52Q8N1B4 723 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 OR6B3Q8NGW1 331 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 ZNF398Q8TD17 642 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 SLC35F5Q8WV83 523 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 EIF2AQ9BY44 585 aaKnown RBP13.35□□□□□ -0.27
LDLR-207ENST00000558013 MTMR10Q9NXD2 777 aa13.35□□□□□ -0.27
LDLR-207ENST00000558013 PPARGC1AQ9UBK2 798 aaKnown RBP13.35□□□□□ -0.27
LDLR-207ENST00000558013 H3BRJ5 948 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 KRT37O76014 449 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 P4HA1P13674 534 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 ATICP31939 592 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 TUBP50607 506 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 GTF2A2P52657 109 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 AQP5P55064 265 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 PKDCCQ504Y2 493 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 CASC4Q6P4E1 433 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 ARMCX2Q7L311 632 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 SPDL1Q96EA4 605 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 VRTNQ9H8Y1 702 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 DONSONQ9NYP3 566 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 LRRC42Q9Y546 428 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 PSAT1Q9Y617 370 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 WDR27A2RRH5 827 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 GOT1P17174 413 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 IGFBP6P24592 240 aaPredicted RBP13.34□□□□□ -0.27
LDLR-207ENST00000558013 PRKCHP24723 683 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 ALDH18A1P54886 795 aaKnown RBP13.34□□□□□ -0.27
LDLR-207ENST00000558013 TTLL12Q14166 644 aaPredicted RBP13.34□□□□□ -0.27
LDLR-207ENST00000558013 TTLL4Q14679 1199 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 ANO7Q6IWH7 933 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 FAM131BQ86XD5 332 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 NUDCD3Q8IVD9 361 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 ENDOVQ8N8Q3 282 aaKnown RBP13.34□□□□□ -0.27
LDLR-207ENST00000558013 MCUR1Q96AQ8 359 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 E2F7Q96AV8 911 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 FAXDC2Q96IV6 333 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 SLC24A3Q9HC58 644 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 HESX1Q9UBX0 185 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 MTO1Q9Y2Z2 717 aaKnown RBP13.34□□□□□ -0.27
LDLR-207ENST00000558013 WASF2Q9Y6W5 498 aa13.34□□□□□ -0.27
LDLR-207ENST00000558013 LOC285556D6RIA3 1793 aa13.33□□□□□ -0.27
LDLR-207ENST00000558013 DCAF8L1A6NGE4 600 aa13.33□□□□□ -0.27
LDLR-207ENST00000558013 B2RBV5 119 aa13.33□□□□□ -0.27
LDLR-207ENST00000558013 TBX10O75333 385 aa13.33□□□□□ -0.27
LDLR-207ENST00000558013 AKAP5P24588 427 aa13.33□□□□□ -0.27
LDLR-207ENST00000558013 UBAP2LQ14157 1087 aaKnown RBP13.33□□□□□ -0.27
LDLR-207ENST00000558013 WASHC2DQ5SRD0 308 aa13.33□□□□□ -0.27
LDLR-207ENST00000558013 RTP4Q96DX8 246 aa13.33□□□□□ -0.27
LDLR-207ENST00000558013 KCTD15Q96SI1 283 aaPredicted RBP13.33□□□□□ -0.27
LDLR-207ENST00000558013 FAM49AQ9H0Q0 323 aaPredicted RBP13.33□□□□□ -0.27
LDLR-207ENST00000558013 GOLGA2P5Q9HBQ8 144 aa13.33□□□□□ -0.27
LDLR-207ENST00000558013 KLK14Q9P0G3 267 aa13.33□□□□□ -0.27
LDLR-207ENST00000558013 BCLAF3A2AJT9 711 aaKnown RBP13.33□□□□□ -0.28
LDLR-207ENST00000558013 ITM2AO43736 263 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 NEBLO76041 1014 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 VAV1P15498 845 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 SESN2P58004 480 aaPredicted RBP13.33□□□□□ -0.28
LDLR-207ENST00000558013 PDK2Q15119 407 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 MAMDC4Q6UXC1 1216 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 PAXIP1Q6ZW49 1069 aaPredicted RBP13.33□□□□□ -0.28
LDLR-207ENST00000558013 TMEM110Q86TL2 294 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 SESTD1Q86VW0 696 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 SLC4A5Q9BY07 1137 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 PNPLA8Q9NP80 782 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 NMRK1Q9NWW6 199 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 DTLQ9NZJ0 730 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 MAGED2Q9UNF1 606 aaPredicted RBP13.33□□□□□ -0.28
LDLR-207ENST00000558013 SMAPO00193 183 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 CAPN9O14815 690 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 MAP3K13O43283 966 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 RARBP10826 455 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 KCNA4P22459 653 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 THOC5Q13769 683 aaKnown RBP13.33□□□□□ -0.28
LDLR-207ENST00000558013 TEX44Q53QW1 395 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 MARCH8Q5T0T0 291 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 LINC01465Q8N7H1 131 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 PDCD7Q8N8D1 485 aaKnown RBP13.33□□□□□ -0.28
LDLR-207ENST00000558013 RBM15BQ8NDT2 890 aaKnown RBP13.33□□□□□ -0.28
LDLR-207ENST00000558013 EBNA1BP2Q99848 306 aaKnown RBP13.33□□□□□ -0.28
LDLR-207ENST00000558013 ITGA11Q9UKX5 1188 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 AP4E1Q9UPM8 1137 aa13.33□□□□□ -0.28
LDLR-207ENST00000558013 PPME1Q9Y570 386 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms