RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ANHXE9PGG2 379 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 TRUB2O95900 331 aaKnown RBP22.18■■□□□ 1.14
CASC4-204ENST00000557945 CYP1A2P05177 515 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 TMEM253P0C7T8 217 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 SULT1E1P49888 294 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 RPL7AP62424 266 aaKnown RBP22.18■■□□□ 1.14
CASC4-204ENST00000557945 PITX1P78337 314 aaPredicted RBP22.18■■□□□ 1.14
CASC4-204ENST00000557945 COG7P83436 770 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 ZXDBP98169 803 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 CCDC173Q0VFZ6 552 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 PPP1R15BQ5SWA1 713 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 TRNP1Q6NT89 227 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 DDX42Q86XP3 938 aaKnown RBP eCLIP22.18■■□□□ 1.14
CASC4-204ENST00000557945 RSAD2Q8WXG1 361 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 E2F7Q96AV8 911 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 ELSPBP1Q96BH3 223 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 RSPRY1Q96DX4 576 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 ZFRQ96KR1 1074 aaKnown RBP22.18■■□□□ 1.14
CASC4-204ENST00000557945 CFAP57Q96MR6 1250 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 SERPINB11Q96P15 392 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 DDIT4Q9NX09 232 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 RRN3Q9NYV6 651 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 COX16Q9P0S2 106 aa22.18■■□□□ 1.14
CASC4-204ENST00000557945 TCF20Q9UGU0 1960 aaKnown RBP22.17■■□□□ 1.14
CASC4-204ENST00000557945 C2CD4BA6NLJ0 364 aa22.17■■□□□ 1.14
CASC4-204ENST00000557945 ECI2O75521 394 aa22.17■■□□□ 1.14
CASC4-204ENST00000557945 GPD1P21695 349 aa22.17■■□□□ 1.14
CASC4-204ENST00000557945 SDC4P31431 198 aa22.17■■□□□ 1.14
CASC4-204ENST00000557945 GBP1P32455 592 aa22.17■■□□□ 1.14
CASC4-204ENST00000557945 NME3Q13232 169 aa22.17■■□□□ 1.14
CASC4-204ENST00000557945 TJAP1Q5JTD0 557 aa22.17■■□□□ 1.14
CASC4-204ENST00000557945 BPIFB1Q8TDL5 484 aa22.17■■□□□ 1.14
CASC4-204ENST00000557945 RPP25Q9BUL9 199 aaKnown RBP22.17■■□□□ 1.14
CASC4-204ENST00000557945 NUP85Q9BW27 656 aa22.17■■□□□ 1.14
CASC4-204ENST00000557945 PLA2G2FQ9BZM2 168 aa22.17■■□□□ 1.14
CASC4-204ENST00000557945 KCNK12Q9HB15 430 aa22.17■■□□□ 1.14
CASC4-204ENST00000557945 OBP2AQ9NY56 170 aa22.17■■□□□ 1.14
CASC4-204ENST00000557945 SH3BP1Q9Y3L3 701 aa22.17■■□□□ 1.14
CASC4-204ENST00000557945 HBS1LQ9Y450 684 aaKnown RBP22.17■■□□□ 1.14
CASC4-204ENST00000557945 M0QYT0 321 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 ARHGAP6O43182 974 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 ASGR2P07307 311 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 KPNA1P52294 538 aaPredicted RBP22.16■■□□□ 1.14
CASC4-204ENST00000557945 TBX4P57082 545 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 ATP11AP98196 1134 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 GRM2Q14416 872 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 ZNF77Q15935 545 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 SLC25A52Q3SY17 297 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 VITQ6UXI7 678 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 YAF2Q8IY57 180 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 ACRBPQ8NEB7 543 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 ADAMTS19Q8TE59 1207 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 NXPE3Q969Y0 559 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 LRRC3BQ96PB8 259 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 TBCBQ99426 244 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 NPY6RQ99463 290 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 DESI2Q9BSY9 194 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 CTTNBP2NLQ9P2B4 639 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 IGSF9Q9P2J2 1179 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 INTUQ9ULD6 942 aa22.16■■□□□ 1.14
CASC4-204ENST00000557945 NUP210Q8TEM1 1887 aaPredicted RBP22.16■■□□□ 1.14
CASC4-204ENST00000557945 SCAMP3O14828 347 aaKnown RBP22.15■■□□□ 1.14
CASC4-204ENST00000557945 TFE3P19532 575 aaPredicted RBP22.15■■□□□ 1.14
CASC4-204ENST00000557945 KRT83P78385 493 aa22.15■■□□□ 1.14
CASC4-204ENST00000557945 USP4Q13107 963 aa22.15■■□□□ 1.14
CASC4-204ENST00000557945 TRIP4Q15650 581 aaPredicted RBP22.15■■□□□ 1.14
CASC4-204ENST00000557945 CDO1Q16878 200 aa22.15■■□□□ 1.14
CASC4-204ENST00000557945 C15orf59Q2T9L4 293 aaPredicted RBP22.15■■□□□ 1.14
CASC4-204ENST00000557945 CCDC14Q49A88 953 aa22.15■■□□□ 1.14
CASC4-204ENST00000557945 CC2D1AQ6P1N0 951 aaPredicted RBP22.15■■□□□ 1.14
CASC4-204ENST00000557945 MFSD6LQ8IWD5 586 aa22.15■■□□□ 1.14
CASC4-204ENST00000557945 RIN3Q8TB24 985 aa22.15■■□□□ 1.14
CASC4-204ENST00000557945 RNF34Q969K3 372 aa22.15■■□□□ 1.14
CASC4-204ENST00000557945 THG1LQ9NWX6 298 aaKnown RBP22.15■■□□□ 1.14
CASC4-204ENST00000557945 LSM7Q9UK45 103 aaKnown RBP22.15■■□□□ 1.14
CASC4-204ENST00000557945 TLR6Q9Y2C9 796 aa22.15■■□□□ 1.14
CASC4-204ENST00000557945 TMEM191CA6NGB0 347 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 C19orf67A6NJJ6 358 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 IRAK2O43187 625 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 STC2O76061 302 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 IGLV3-25P01717 112 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 TCF3P15923 654 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 DESP17661 470 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 PSMC3P17980 439 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 CCZ1BP86790 482 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 CCZ1P86791 482 aaPredicted RBP22.14■■□□□ 1.14
CASC4-204ENST00000557945 DEUP1Q05D60 604 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 KIAA1328Q86T90 577 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 DEPDC1BQ8WUY9 529 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 NT5C3BQ969T7 300 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 WBP2Q969T9 261 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 PLD4Q96BZ4 506 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 TRIM7Q9C029 511 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 TFR2Q9UP52 801 aa22.14■■□□□ 1.14
CASC4-204ENST00000557945 REXO2Q9Y3B8 237 aaKnown RBP22.14■■□□□ 1.14
CASC4-204ENST00000557945 E2F8A0AVK6 867 aa22.13■■□□□ 1.13
CASC4-204ENST00000557945 F9P00740 461 aa22.13■■□□□ 1.13
CASC4-204ENST00000557945 PSMA2P25787 234 aa22.13■■□□□ 1.13
CASC4-204ENST00000557945 CORO1AP31146 461 aaKnown RBP22.13■■□□□ 1.13
CASC4-204ENST00000557945 PTPN9P43378 593 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms