RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TRIB1Q96RU8 372 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 PAAF1Q9BRP4 392 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 C2orf40Q9H1Z8 148 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 MROH8Q9H579 483 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 L2HGDHQ9H9P8 463 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 XAB2Q9HCS7 855 aaKnown RBP4.11□□□□□ -1.75
TDP1-217ENST00000557782 PDE7BQ9NP56 450 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 ZDHHC7Q9NXF8 308 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 TAB2Q9NYJ8 693 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 SLC25A10Q9UBX3 287 aaPredicted RBP4.11□□□□□ -1.75
TDP1-217ENST00000557782 ZNF70Q9UC06 446 aaPredicted RBP4.11□□□□□ -1.75
TDP1-217ENST00000557782 CTNND2Q9UQB3 1225 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 PCDHGB5Q9Y5G0 923 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 KCNE2Q9Y6J6 123 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 FAM169AQ9Y6X4 670 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 PNPLA7Q6ZV29 1317 aa4.11□□□□□ -1.75
TDP1-217ENST00000557782 C17orf113A0A1B0GUU1 675 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 MBD3L5A6NJ08 208 aaPredicted RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 MYO1GB0I1T2 1018 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 PSMA7O14818 248 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 TNFSF14O43557 240 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 HNRNPCL1O60812 293 aaKnown RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 TGDSO95455 350 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 LMNAP02545 664 aaKnown RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 TUBB4AP04350 444 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 CHN1P15882 459 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 ITGB5P18084 799 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 SAT1P21673 171 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 TBXAS1P24557 533 aaPredicted RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 EPHA3P29320 983 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 NTSR1P30989 418 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 VIPR1P32241 457 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 IL13P35225 146 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 THBS4P35443 961 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 CTCFP49711 727 aaPredicted RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 GATMP50440 423 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 PDE6CP51160 858 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 ZNF134P52741 427 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 UBXN2AP68543 259 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 ADAM8P78325 824 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 RBM6P78332 1123 aaKnown RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 PRAMEP78395 509 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 NEXNQ0ZGT2 675 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 BFSP1Q12934 665 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 THOC5Q13769 683 aaKnown RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 CCNIQ14094 377 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 E2F2Q14209 437 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 USP10Q14694 798 aaKnown RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 CLCA4Q14CN2 919 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 KYNUQ16719 465 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 BMT2Q1RMZ1 405 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 PTCHD3Q3KNS1 767 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 TTC31Q49AM3 519 aaPredicted RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 ZNF766Q5HY98 468 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 LCE2AQ5TA79 106 aaPredicted RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 ANKS6Q68DC2 871 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 TAPT1Q6NXT6 567 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 RAPH1Q70E73 1250 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 LDHDQ86WU2 507 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 ZFPM1Q8IX07 1006 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 THNSL1Q8IYQ7 743 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 KIAA2013Q8IYS2 634 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 ADGRF2Q8IZF7 708 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 SYNE4Q8N205 404 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 WDTC1Q8N5D0 677 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 LINC00482Q8N8I6 264 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 NUDT10Q8NFP7 164 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 OR14K1Q8NGZ2 314 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 GOT1L1Q8NHS2 421 aaPredicted RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 MGARPQ8TDB4 240 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 ARHGEF2Q92974 986 aaKnown RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 ELP4Q96EB1 424 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 NUDT11Q96G61 164 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 ZNF845Q96IR2 970 aaPredicted RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 FAR2Q96K12 515 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 GPATCH1Q9BRR8 931 aaKnown RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 HGH1Q9BTY7 390 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 PTDSS2Q9BVG9 487 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 TLR10Q9BXR5 811 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 TEX12Q9BXU0 123 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 CXorf36Q9H7Y0 433 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 KAT14Q9H8E8 782 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 GBA2Q9HCG7 927 aaPredicted RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 IL23AQ9NPF7 189 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 ARHGEF3Q9NR81 526 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 FBXO28Q9NVF7 368 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 MPP6Q9NZW5 540 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 CPSF2Q9P2I0 782 aaKnown RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 HDAC5Q9UQL6 1122 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 OSGIN2Q9Y236 505 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 MRPS17Q9Y2R5 130 aaKnown RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 UBE2J1Q9Y385 318 aaPredicted RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 ZFP37Q9Y6Q3 630 aaPredicted RBP4.1□□□□□ -1.75
TDP1-217ENST00000557782 FLT1P17948 1338 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 COL15A1P39059 1388 aa4.1□□□□□ -1.75
TDP1-217ENST00000557782 FER1L4A9Z1Z3 1794 aa4.09□□□□□ -1.75
TDP1-217ENST00000557782 TBC1D3DA0A087WVF3 549 aa4.09□□□□□ -1.75
TDP1-217ENST00000557782 TBC1D3IA0A087WXS9 549 aa4.09□□□□□ -1.75
TDP1-217ENST00000557782 TBC1D3EA0A087X179 549 aa4.09□□□□□ -1.75
TDP1-217ENST00000557782 TBC1D3KA0A087X1G2 549 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms