RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 SLC12A6Q9UHW9 1150 aa14.29□□□□□ -0.12
SHMT2-234ENST00000557703 SIGLEC16A6NMB1 481 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 GOLGA6L6A8MZA4 724 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 DLL1O00548 723 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 GPR37L1O60883 481 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 TECTAO75443 2155 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 DAB1O75553 588 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 STC2O76061 302 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 ADH1CP00326 375 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 FYNP06241 537 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 EIF2DP41214 584 aaKnown RBP14.28□□□□□ -0.12
SHMT2-234ENST00000557703 ZXDBP98169 803 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 RUNX3Q13761 415 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 GRM2Q14416 872 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 EML3Q32P44 896 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 DCAF6Q58WW2 860 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 FAM102AQ5T9C2 384 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-234ENST00000557703 FAM183BPQ6ZVS7 135 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 MON1BQ7L1V2 547 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 SUGP1Q8IWZ8 645 aaKnown RBP14.28□□□□□ -0.12
SHMT2-234ENST00000557703 CPXM2Q8N436 756 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 EDEM1Q92611 657 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 PCDHB18PQ96TA0 734 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 DDX23Q9BUQ8 820 aaKnown RBP14.28□□□□□ -0.12
SHMT2-234ENST00000557703 SMG9Q9H0W8 520 aaKnown RBP14.28□□□□□ -0.12
SHMT2-234ENST00000557703 ARHGEF3Q9NR81 526 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.28□□□□□ -0.12
SHMT2-234ENST00000557703 SMPD4Q9NXE4 827 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.28□□□□□ -0.12
SHMT2-234ENST00000557703 RASAL2Q9UJF2 1139 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 STOML2Q9UJZ1 356 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 TMEM59LQ9UK28 342 aa14.28□□□□□ -0.12
SHMT2-234ENST00000557703 SLC12A8A0AV02 714 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 NCAM2O15394 837 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 IRAK2O43187 625 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 GREM1O60565 184 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 IGLV3-25P01717 112 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 IGLV3-27P01718 113 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 KRT3P12035 628 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 MAGEA9P43362 315 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 SLC11A2P49281 568 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 NUBP1P53384 320 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 PTP4A2Q12974 167 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 EIF4EBP2Q13542 120 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-234ENST00000557703 MLF2Q15773 248 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-234ENST00000557703 SLC25A52Q3SY17 297 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 C10orf76Q5T2E6 689 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 E4F1Q66K89 784 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-234ENST00000557703 ZNF852Q6ZMS4 543 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 Q6ZNB5 142 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 MMS22LQ6ZRQ5 1243 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 NUDT18Q6ZVK8 323 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 HFE2Q6ZVN8 426 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 SND1Q7KZF4 910 aaKnown RBP eCLIP14.27□□□□□ -0.13
SHMT2-234ENST00000557703 TMC6Q7Z403 805 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 MIB1Q86YT6 1006 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 MCOLN2Q8IZK6 566 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 ZNF557Q8N988 423 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-234ENST00000557703 DQX1Q8TE96 717 aaKnown RBP14.27□□□□□ -0.13
SHMT2-234ENST00000557703 CLEC4CQ8WTT0 213 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 NDRG1Q92597 394 aaKnown RBP14.27□□□□□ -0.13
SHMT2-234ENST00000557703 KHSRPQ92945 711 aaKnown RBP eCLIP14.27□□□□□ -0.13
SHMT2-234ENST00000557703 ASIC4Q96FT7 647 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 PANX2Q96RD6 677 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 NCAPGQ9BPX3 1015 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 ECT2Q9H8V3 914 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 MRPL47Q9HD33 250 aaKnown RBP14.27□□□□□ -0.13
SHMT2-234ENST00000557703 PARVAQ9NVD7 372 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 ADAMTS1Q9UHI8 967 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 LCMT1Q9UIC8 334 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 SCINQ9Y6U3 715 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 ZDBF2Q9HCK1 2354 aa14.27□□□□□ -0.13
SHMT2-234ENST00000557703 KIF26AQ9ULI4 1882 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-234ENST00000557703 PIK3R2O00459 728 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 DDX3XO00571 662 aaKnown RBP eCLIP14.26□□□□□ -0.131e-14■■□□□ 13.5
SHMT2-234ENST00000557703 NARSO43776 548 aaKnown RBP14.26□□□□□ -0.13
SHMT2-234ENST00000557703 TRUB2O95900 331 aaKnown RBP14.26□□□□□ -0.13
SHMT2-234ENST00000557703 FTLP02792 175 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-234ENST00000557703 CCR1P32246 355 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 CLCN5P51795 746 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 TBX4P57082 545 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 PPP2R5DQ14738 602 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 E2F5Q15329 346 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 SLC18A3Q16572 532 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 BRMS1LQ5PSV4 323 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 MPP7Q5T2T1 576 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 ADGRF1Q5T601 910 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 ALKBH5Q6P6C2 394 aaKnown RBP14.26□□□□□ -0.13
SHMT2-234ENST00000557703 FAM217AQ8IXS0 508 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 DEFB106AQ8N104 65 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 SLC39A13Q96H72 371 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 CCDC42Q96M95 316 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 C11orf70Q9BRQ4 267 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 SELENOOQ9BVL4 669 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 MARK1Q9P0L2 795 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 ARHGAP20Q9P2F6 1191 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 NAALADL1Q9UQQ1 740 aa14.26□□□□□ -0.13
SHMT2-234ENST00000557703 TMEM221A6NGB7 291 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 PRR33A8MZF0 331 aa14.25□□□□□ -0.13
SHMT2-234ENST00000557703 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms