RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 DCLK3Q9C098 648 aa14.87□□□□□ -0.03
SNX6-210ENST00000557341 METTL14Q9HCE5 456 aaKnown RBP14.87□□□□□ -0.03
SNX6-210ENST00000557341 HESX1Q9UBX0 185 aa14.87□□□□□ -0.03
SNX6-210ENST00000557341 TSPAN16Q9UKR8 245 aa14.87□□□□□ -0.03
SNX6-210ENST00000557341 STRIP2Q9ULQ0 834 aa14.87□□□□□ -0.03
SNX6-210ENST00000557341 PCDH15Q96QU1 1955 aa14.87□□□□□ -0.03
SNX6-210ENST00000557341 KMT2BQ9UMN6 2715 aaPredicted RBP14.86□□□□□ -0.03
SNX6-210ENST00000557341 PRRT4C9JH25 899 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 TM4SF5O14894 197 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 XPO1O14980 1071 aaKnown RBP14.86□□□□□ -0.03
SNX6-210ENST00000557341 CD19P15391 556 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 GABRG2P18507 467 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 CHKAP35790 457 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 WASP42768 502 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 TKTL1P51854 596 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 BST2Q10589 180 aaKnown RBP14.86□□□□□ -0.03
SNX6-210ENST00000557341 MAP7D1Q3KQU3 841 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 TOGARAM2Q6ZUX3 1019 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 DHTKD1Q96HY7 919 aaPredicted RBP14.86□□□□□ -0.03
SNX6-210ENST00000557341 CEP63Q96MT8 703 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 PLK2Q9NYY3 685 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 MARCH2Q9P0N8 246 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 CALCOCO1Q9P1Z2 691 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 HCN2Q9UL51 889 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 EPG5Q9HCE0 2579 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 GON4LQ3T8J9 2241 aa14.86□□□□□ -0.03
SNX6-210ENST00000557341 ASCC3Q8N3C0 2202 aaKnown RBP14.86□□□□□ -0.03
SNX6-210ENST00000557341 MAP1BP46821 2468 aaKnown RBP14.86□□□□□ -0.03
SNX6-210ENST00000557341 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 A0A1W2PQF6 199 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 ZBTB24O43167 697 aaPredicted RBP14.85□□□□□ -0.03
SNX6-210ENST00000557341 ZBED1O96006 694 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 KLKB1P03952 638 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 HMBSP08397 361 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 DPP6P42658 865 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 FMO5P49326 533 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 PDE4CQ08493 712 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 ADIGQ0VDE8 80 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 CCDC40Q4G0X9 1142 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 SPDYCQ5MJ68 293 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 PM20D1Q6GTS8 502 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 ARMCX6Q7L4S7 300 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 ELOA2Q8IYF1 753 aaPredicted RBP14.85□□□□□ -0.03
SNX6-210ENST00000557341 TMEFF1Q8IYR6 380 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 PIGKQ92643 395 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 PLD4Q96BZ4 506 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 IPO9Q96P70 1041 aaKnown RBP14.85□□□□□ -0.03
SNX6-210ENST00000557341 ACOX2Q99424 681 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 GABRG3Q99928 467 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 LSM14BQ9BX40 385 aaKnown RBP14.85□□□□□ -0.03
SNX6-210ENST00000557341 ULBP1Q9BZM6 244 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 LRRC4Q9HBW1 653 aa14.85□□□□□ -0.03
SNX6-210ENST00000557341 OLA1Q9NTK5 396 aaKnown RBP14.85□□□□□ -0.03
SNX6-210ENST00000557341 MBD1Q9UIS9 605 aaPredicted RBP14.85□□□□□ -0.03
SNX6-210ENST00000557341 SLC12A8A0AV02 714 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 PATE3B3GLJ2 98 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 TULP2O00295 520 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 AP5Z1O43299 807 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 PENKP01210 267 aaPredicted RBP14.84□□□□□ -0.03
SNX6-210ENST00000557341 CYBBP04839 570 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 CISD3P0C7P0 127 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 SETSIPP0DME0 302 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 VDRP11473 427 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 NDUFV2P19404 249 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 PTGER3P43115 390 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 LRMPQ12912 555 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 DAB2IPQ5VWQ8 1189 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 FYB2Q5VWT5 728 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 LYSMD4Q5XG99 296 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 ISM2Q6H9L7 571 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 KLHL10Q6JEL2 608 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 SLC36A4Q6YBV0 504 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 BHLHA9Q7RTU4 235 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 SIX6OS1Q8N1H7 587 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 CPXM2Q8N436 756 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 UBR7Q8N806 425 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 FRMD1Q8N878 549 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 IPO4Q8TEX9 1081 aaKnown RBP14.84□□□□□ -0.03
SNX6-210ENST00000557341 CNTNAP3BQ96NU0 1288 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 NT5C1BQ96P26 610 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 CNTNAP3Q9BZ76 1288 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 TMEM9BQ9NQ34 198 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 EVLQ9UI08 416 aaPredicted RBP14.84□□□□□ -0.03
SNX6-210ENST00000557341 FBXO10Q9UK96 956 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 MAN1B1Q9UKM7 699 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 AGO1Q9UL18 857 aaKnown RBP14.84□□□□□ -0.03
SNX6-210ENST00000557341 SLC27A6Q9Y2P4 619 aa14.84□□□□□ -0.03
SNX6-210ENST00000557341 CACNA1EQ15878 2313 aa14.83□□□□□ -0.03
SNX6-210ENST00000557341 BICDL2A1A5D9 508 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 C4orf47A7E2U8 309 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 O00370 1275 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 GFRA2O00451 464 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 PMM2O15305 246 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 ZNF217O75362 1048 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 CD44P16070 742 aaKnown RBP14.83□□□□□ -0.04
SNX6-210ENST00000557341 HOXD12P35452 270 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 MFAP3P55082 362 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 RPL6Q02878 288 aaKnown RBP14.83□□□□□ -0.04
SNX6-210ENST00000557341 CETN1Q12798 172 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 LMAN2Q12907 356 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms