RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 ZNF510Q9Y2H8 683 aa14.19□□□□□ -0.14
SHMT2-228ENST00000557302 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.19□□□□□ -0.14
SHMT2-228ENST00000557302 TICRRQ7Z2Z1 1910 aa14.19□□□□□ -0.14
SHMT2-228ENST00000557302 SHISA7A6NL88 538 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 MSI1O43347 362 aaKnown RBP14.18□□□□□ -0.14
SHMT2-228ENST00000557302 ADH1CP00326 375 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 CYP17A1P05093 508 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 UNGP13051 313 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-228ENST00000557302 MMP8P22894 467 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 CORO1AP31146 461 aaKnown RBP14.18□□□□□ -0.14
SHMT2-228ENST00000557302 GJA4P35212 333 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 SCNN1AP37088 669 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 PLA2G5P39877 138 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 PRKCIP41743 596 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 NSFP46459 744 aaKnown RBP14.18□□□□□ -0.14
SHMT2-228ENST00000557302 ZBED6P86452 979 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 DHCR24Q15392 516 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 TAF5Q15542 800 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 TRIP4Q15650 581 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-228ENST00000557302 CLEC16AQ2KHT3 1053 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 SPECC1LQ69YQ0 1117 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 TXNDC11Q6PKC3 985 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 SARM1Q6SZW1 724 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 Q6ZNB5 142 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 MMS22LQ6ZRQ5 1243 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 SLC26A9Q7LBE3 791 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 XYLT1Q86Y38 959 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 ADGRG2Q8IZP9 1017 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 PJA1Q8NG27 643 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 CPLX3Q8WVH0 158 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 SERPINB11Q96P15 392 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 SLC2A13Q96QE2 648 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 ANP32EQ9BTT0 268 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 OSBPL6Q9BZF3 934 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 RBSNQ9H1K0 784 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 CAPN11Q9UMQ6 739 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 NDRG2Q9UN36 371 aaKnown RBP14.18□□□□□ -0.14
SHMT2-228ENST00000557302 LUC7L2Q9Y383 392 aaKnown RBP14.18□□□□□ -0.14
SHMT2-228ENST00000557302 SIT1Q9Y3P8 196 aa14.18□□□□□ -0.14
SHMT2-228ENST00000557302 FAM170BA6NMN3 283 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 DAB1O75553 588 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 GRAP2O75791 330 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 KLKB1P03952 638 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 GYPCP04921 128 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 TNFAIP3P21580 790 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 TARSP26639 723 aaKnown RBP14.17□□□□□ -0.14
SHMT2-228ENST00000557302 AVPR2P30518 371 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 HARS2P49590 506 aaKnown RBP14.17□□□□□ -0.14
SHMT2-228ENST00000557302 VCPP55072 806 aaKnown RBP14.17□□□□□ -0.14
SHMT2-228ENST00000557302 CDK17Q00537 523 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 CENPCQ03188 943 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 KLHL30Q0D2K2 578 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 TRIM14Q14142 442 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 C2CD6Q53TS8 623 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 DCAF6Q58WW2 860 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 LY6G5CQ5SRR4 150 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 FAM102AQ5T9C2 384 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-228ENST00000557302 SYPL2Q5VXT5 272 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 E4F1Q66K89 784 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-228ENST00000557302 RHBDF2Q6PJF5 856 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 TAC4Q86UU9 113 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 DENND1CQ8IV53 801 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 VSTM4Q8IW00 320 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 DEFB106AQ8N104 65 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 TMEM105Q8N8V8 129 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 SLC30A5Q8TAD4 765 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 SYN2Q92777 582 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-228ENST00000557302 EXOC4Q96A65 974 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 C11orf70Q9BRQ4 267 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 SYT11Q9BT88 431 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 HAUS4Q9H6D7 363 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 SPHK2Q9NRA0 654 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 HCN4Q9Y3Q4 1203 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 COL4A3Q01955 1670 aa14.17□□□□□ -0.14
SHMT2-228ENST00000557302 GOLGA8SH3BPF8 625 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 NCAM2O15394 837 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 PI15O43692 258 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 TRUB2O95900 331 aaKnown RBP14.16□□□□□ -0.14
SHMT2-228ENST00000557302 ADH5P11766 374 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 CASP14P31944 242 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 TBX4P57082 545 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 GAD2Q05329 585 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 RING1Q06587 406 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 NNTQ13423 1086 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 PON2Q15165 354 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 NUGGCQ68CJ6 796 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 PPP1R2P3Q6NXS1 205 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 GAS2L3Q86XJ1 694 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 PHF13Q86YI8 300 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-228ENST00000557302 CCDC105Q8IYK2 499 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 ADAM32Q8TC27 787 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 CHFRQ96EP1 664 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 TRIM5Q9C035 493 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 FAM204AQ9H8W3 233 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 ADAM22Q9P0K1 906 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 AGO1Q9UL18 857 aaKnown RBP14.16□□□□□ -0.14
SHMT2-228ENST00000557302 TLR6Q9Y2C9 796 aa14.16□□□□□ -0.14
SHMT2-228ENST00000557302 MTF2Q9Y483 593 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-228ENST00000557302 TRDMT1O14717 391 aaKnown RBP14.15□□□□□ -0.14
SHMT2-228ENST00000557302 LATS1O95835 1130 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms