RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 SCML2Q9UQR0 700 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 TMEM8BA6NDV4 472 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 IKBKBO14920 756 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 AP5Z1O43299 807 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 SERPINF2P08697 491 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 IRF1P10914 325 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 HOXB2P14652 356 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 TYRP14679 529 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 NDUFV2P19404 249 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 PSEN1P49768 467 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 MAP3K7CLP57077 242 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 RPL6Q02878 288 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 LRRC63Q05C16 580 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 INCA1Q0VD86 236 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 DUOXA1Q1HG43 343 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 GRAMD4Q6IC98 578 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 SPOPLQ6IQ16 392 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 KLHDC10Q6PID8 442 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 Q6ZNB5 142 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 CLEC20AQ6ZU45 233 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 TOGARAM2Q6ZUX3 1019 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 NUDT18Q6ZVK8 323 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 PGBD3Q8N328 593 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 DEFB119Q8N690 84 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 CEP76Q8TAP6 659 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 IPO4Q8TEX9 1081 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 NMUR1Q9HB89 426 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 DNAJC17Q9NVM6 304 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 WDR35Q9P2L0 1181 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 PCNX2A6NKB5 2137 aa11.29□□□□□ -0.6
HNRNPC-230ENST00000557201 FAM221BA6H8Z2 402 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 NEDD8-MDP1E9PL57 170 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 CYP26A1O43174 497 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 CALUO43852 315 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 GJB3O75712 270 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 NR3C1P04150 777 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 P4HA1P13674 534 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 CD59P13987 128 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 RPL13P26373 211 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 ATP5C1P36542 298 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 WASP42768 502 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 MCCD1P59942 119 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 ZNF33AQ06730 810 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 DPCR1Q3MIW9 517 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 SASS6Q6UVJ0 657 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 SCD5Q86SK9 330 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 ZNF276Q8N554 614 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 ZNF419Q96HQ0 510 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 MRGPRX1Q96LB2 322 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 BBS2Q9BXC9 721 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 SLC32A1Q9H598 525 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 APOBEC3GQ9HC16 384 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 PNPLA8Q9NP80 782 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 CD93Q9NPY3 652 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 FAM49BQ9NUQ9 324 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 NEUROG3Q9Y4Z2 214 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 PI4KAP42356 2102 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 GON4LQ3T8J9 2241 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 CEP192Q8TEP8 1941 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 SPAARA0A1B0GVQ0 90 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 A0A1W2PQH9 124 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 BICDL2A1A5D9 508 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 GFRA2O00451 464 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 ARHGAP33O14559 1287 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 MDM4O15151 490 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 MAPK13O15264 365 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 HYAL3O43820 417 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 ZNF217O75362 1048 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 PENKP01210 267 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 HLA-DRAP01903 254 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 KLKB1P03952 638 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 CAPNS1P04632 268 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 CFIP05156 583 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 FAM200BP0CF97 657 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 ERCC5P28715 1186 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 KIF11P52732 1056 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 PMS1P54277 932 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 FAM193AP78312 1265 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 FKBP3Q00688 224 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 GFPT1Q06210 699 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 PAK1Q13153 545 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 ADAM9Q13443 819 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 ENPP2Q13822 863 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 ANKRD40Q6AI12 368 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 TTI2Q6NXR4 508 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 TPGS1Q6ZTW0 290 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 ZC3H3Q8IXZ2 948 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 CHPFQ8IZ52 775 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 XPO6Q96QU8 1125 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 TSG101Q99816 390 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 NACA2Q9H009 215 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 SLC6A17Q9H1V8 727 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 DNAAF2Q9NVR5 837 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 ANO10Q9NW15 660 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 DACH1Q9UI36 760 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 RWDD2AQ9UIY3 292 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 KLK13Q9UKR3 277 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 MSRB2Q9Y3D2 182 aa11.28□□□□□ -0.6
HNRNPC-230ENST00000557201 USP3Q9Y6I4 520 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms