RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 SLC6A3Q01959 620 aa17.15■□□□□ 0.34
PCNX4-213ENST00000556907 IFI16Q16666 785 aaKnown RBP17.15■□□□□ 0.34
PCNX4-213ENST00000556907 UBALD2Q8IYN6 164 aa17.15■□□□□ 0.34
PCNX4-213ENST00000556907 BPIFB1Q8TDL5 484 aa17.15■□□□□ 0.34
PCNX4-213ENST00000556907 USP13Q92995 863 aaPredicted RBP17.15■□□□□ 0.34
PCNX4-213ENST00000556907 CYP2S1Q96SQ9 504 aa17.15■□□□□ 0.34
PCNX4-213ENST00000556907 CCSER2Q9H7U1 834 aa17.15■□□□□ 0.34
PCNX4-213ENST00000556907 POPDC2Q9HBU9 364 aa17.15■□□□□ 0.34
PCNX4-213ENST00000556907 OSER1Q9NX31 292 aa17.15■□□□□ 0.34
PCNX4-213ENST00000556907 CNOT8Q9UFF9 292 aaKnown RBP17.15■□□□□ 0.34
PCNX4-213ENST00000556907 CAPN6Q9Y6Q1 641 aa17.15■□□□□ 0.34
PCNX4-213ENST00000556907 SCINQ9Y6U3 715 aa17.15■□□□□ 0.34
PCNX4-213ENST00000556907 DUSP10Q9Y6W6 482 aa17.15■□□□□ 0.34
PCNX4-213ENST00000556907 TCRBV5S1A1TA0A578 114 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 MACROD2A1Z1Q3 448 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 PIK3R2O00459 728 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 HSF2BPO75031 334 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 RRM1P23921 792 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 PFKPQ01813 784 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 FCHO2Q0JRZ9 810 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 C10orf120Q5SQS8 335 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 OR6B2Q6IFH4 312 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 PLEKHA7Q6IQ23 1121 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 MSANTD2Q6P1R3 559 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 SLC26A9Q7LBE3 791 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 ARCQ7LC44 396 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 YAF2Q8IY57 180 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 C3orf20Q8ND61 904 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 FAM149B1Q96BN6 582 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 SLC22A12Q96S37 553 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 TRMT61BQ9BVS5 477 aaKnown RBP17.14■□□□□ 0.33
PCNX4-213ENST00000556907 TRPV5Q9NQA5 729 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 RRN3Q9NYV6 651 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 CPQQ9Y646 472 aa17.14■□□□□ 0.33
PCNX4-213ENST00000556907 HELZP42694 1942 aaKnown RBP17.13■□□□□ 0.33
PCNX4-213ENST00000556907 FAM170AA1A519 330 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 SLC9A3R1O14745 358 aaPredicted RBP17.13■□□□□ 0.33
PCNX4-213ENST00000556907 CAPN9O14815 690 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 CHADO15335 359 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 MOCS3O95396 460 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 PRAMEF12O95522 483 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 ERBB2P04626 1255 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 SRFP11831 508 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 ALADP13716 330 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 VIPR2P41587 438 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 PGFP49763 221 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 ETF1P62495 437 aaKnown RBP17.13■□□□□ 0.33
PCNX4-213ENST00000556907 USP4Q13107 963 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 ZNF77Q15935 545 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 CC2D1AQ6P1N0 951 aaPredicted RBP17.13■□□□□ 0.33
PCNX4-213ENST00000556907 OLFML1Q6UWY5 402 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 VITQ6UXI7 678 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 XYLT1Q86Y38 959 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 TRIM58Q8NG06 486 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 SLC35G2Q8TBE7 412 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 ZNF564Q8TBZ8 553 aaPredicted RBP17.13■□□□□ 0.33
PCNX4-213ENST00000556907 IRF7Q92985 503 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 NECAB3Q96P71 396 aaPredicted RBP17.13■□□□□ 0.33
PCNX4-213ENST00000556907 ALS2CR12Q96Q35 445 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 NUP85Q9BW27 656 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 CD320Q9NPF0 282 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 SLC2A4RGQ9NR83 387 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 DUSP12Q9UNI6 340 aa17.13■□□□□ 0.33
PCNX4-213ENST00000556907 HBS1LQ9Y450 684 aaKnown RBP17.13■□□□□ 0.33
PCNX4-213ENST00000556907 E2F8A0AVK6 867 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 LEFTY2O00292 366 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 ASGR2P07307 311 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 NCAM1P13591 858 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 NNTQ13423 1086 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 DNAJC24Q6P3W2 148 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 FAM183BPQ6ZVS7 135 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 SLC35F6Q8N357 371 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 TPCN2Q8NHX9 752 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 SH3RF2Q8TEC5 729 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 CLEC4CQ8WTT0 213 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 RSAD2Q8WXG1 361 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 NDRG1Q92597 394 aaKnown RBP17.12■□□□□ 0.33
PCNX4-213ENST00000556907 OTUB2Q96DC9 234 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 SLC2A13Q96QE2 648 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 KXD1Q9BQD3 176 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 KLF16Q9BXK1 252 aaPredicted RBP17.12■□□□□ 0.33
PCNX4-213ENST00000556907 IRX2Q9BZI1 471 aaPredicted RBP17.12■□□□□ 0.33
PCNX4-213ENST00000556907 DCLK3Q9C098 648 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 MRPL47Q9HD33 250 aaKnown RBP17.12■□□□□ 0.33
PCNX4-213ENST00000556907 OSGEPQ9NPF4 335 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 MARCH2Q9P0N8 246 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 CTTNBP2NLQ9P2B4 639 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 TBC1D14Q9P2M4 693 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 TJP2Q9UDY2 1190 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 ZNF510Q9Y2H8 683 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 PAXBP1Q9Y5B6 917 aa17.12■□□□□ 0.33
PCNX4-213ENST00000556907 GRID2IPA4D2P6 1211 aa17.11■□□□□ 0.33
PCNX4-213ENST00000556907 BUB1O43683 1085 aa17.11■□□□□ 0.33
PCNX4-213ENST00000556907 TBX18O95935 607 aa17.11■□□□□ 0.33
PCNX4-213ENST00000556907 TNNT1P13805 278 aa17.11■□□□□ 0.33
PCNX4-213ENST00000556907 GNG11P61952 73 aa17.11■□□□□ 0.33
PCNX4-213ENST00000556907 EFEMP1Q12805 493 aa17.11■□□□□ 0.33
PCNX4-213ENST00000556907 PDGFRLQ15198 375 aa17.11■□□□□ 0.33
PCNX4-213ENST00000556907 C2CD6Q53TS8 623 aa17.11■□□□□ 0.33
PCNX4-213ENST00000556907 ZNF569Q5MCW4 686 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms