RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 NPHS1O60500 1241 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 PLA2G6O60733 806 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 CD2BP2O95400 341 aaKnown RBP1.9□□□□□ -2.1
KTN1-224ENST00000556631 DLGAP3O95886 979 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 SCGB1D1O95968 90 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 CTSHP09668 335 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 CALM1P0DP23 149 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 CALM2P0DP24 149 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 CALM3P0DP25 149 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 RPS2P15880 293 aaKnown RBP1.9□□□□□ -2.1
KTN1-224ENST00000556631 ALAS2P22557 587 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 PSMA2P25787 234 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 LTKP29376 864 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 PTPN7P35236 360 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 BAG6P46379 1132 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 ALDH9A1P49189 494 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 NUP107P57740 925 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 EIF3EP60228 445 aaKnown RBP1.9□□□□□ -2.1
KTN1-224ENST00000556631 ACTR2P61160 394 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 SSTP61278 116 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 YWHAEP62258 255 aaKnown RBP1.9□□□□□ -2.1
KTN1-224ENST00000556631 RPP38P78345 283 aaKnown RBP1.9□□□□□ -2.1
KTN1-224ENST00000556631 CLDN10P78369 228 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 NR5A1Q13285 461 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 LRP8Q14114 963 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 CAPRIN1Q14444 709 aaKnown RBP1.9□□□□□ -2.1
KTN1-224ENST00000556631 DHCR24Q15392 516 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 NR0B2Q15466 257 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 TYSND1Q2T9J0 566 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 GDF6Q6KF10 455 aaPredicted RBP1.9□□□□□ -2.1
KTN1-224ENST00000556631 BORAQ6PGQ7 559 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 CWC27Q6UX04 472 aaKnown RBP1.9□□□□□ -2.1
KTN1-224ENST00000556631 LDHAL6AQ6ZMR3 332 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 FAM196AQ6ZSG2 479 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 PXKQ7Z7A4 578 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 SLC51BQ86UW2 128 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 EXOC3L1Q86VI1 746 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 NRSN1Q8IZ57 195 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 CENPLQ8N0S6 344 aaPredicted RBP1.9□□□□□ -2.1
KTN1-224ENST00000556631 MARVELD2Q8N4S9 558 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 U2AF1L4Q8WU68 220 aaKnown RBP1.9□□□□□ -2.1
KTN1-224ENST00000556631 ST8SIA4Q92187 359 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 DDX1Q92499 740 aaKnown RBP1.9□□□□□ -2.1
KTN1-224ENST00000556631 BRF1Q92994 677 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 ULK4Q96C45 1275 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 HS6ST2Q96MM7 605 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 NSUN5Q96P11 429 aaKnown RBP1.9□□□□□ -2.1
KTN1-224ENST00000556631 TBCDQ9BTW9 1192 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 PHF20Q9BVI0 1012 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 TXLNGYQ9BZA5 131 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 EPB41L1Q9H4G0 881 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 Q9H521 79 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 ING3Q9NXR8 418 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 TAS2R10Q9NYW0 307 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 SH3BP4Q9P0V3 963 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 ANKMY1Q9P2S6 941 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 MAD2L2Q9UI95 211 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 AMFRQ9UKV5 643 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 PCDHGA11Q9Y5H2 935 aa1.9□□□□□ -2.1
KTN1-224ENST00000556631 CECR2Q9BXF3 1484 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 USP31Q70CQ4 1352 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 LOC100653049A0A140TA62 436 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.9□□□□□ -2.11
KTN1-224ENST00000556631 E9PI62 339 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 POLRMTO00411 1230 aaKnown RBP1.9□□□□□ -2.11
KTN1-224ENST00000556631 GPR182O15218 404 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 SPTLC2O15270 562 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 CIDEAO60543 219 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 NDUFS3O75489 264 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 KRT34O76011 436 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 KCNK5O95279 499 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 STAG3L1P0CL83 205 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 C8orf89P0DMQ9 161 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 TFPIP10646 304 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 S100A1P23297 94 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 HTR1BP28222 390 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 RRM2P31350 389 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 S100A5P33763 92 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 NPBWR1P48145 328 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 INPP1P49441 399 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 RAD23AP54725 363 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 EPHB3P54753 998 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 OXCT1P55809 520 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 RPL11P62913 178 aaKnown RBP1.9□□□□□ -2.11
KTN1-224ENST00000556631 NOMO3P69849 1222 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 GPSM2P81274 684 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 MERTKQ12866 999 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 NPRL3Q12980 569 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 HNF4GQ14541 408 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 MYBPC3Q14896 1274 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 MORF4L2Q15014 288 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 EZH2Q15910 746 aaKnown RBP1.9□□□□□ -2.11
KTN1-224ENST00000556631 INSCQ1MX18 579 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 LRIT3Q3SXY7 679 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 DALRD3Q5D0E6 543 aaKnown RBP1.9□□□□□ -2.11
KTN1-224ENST00000556631 C6orf183Q5T699 404 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 ERMARDQ5T6L9 678 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 INTS11Q5TA45 600 aaKnown RBP1.9□□□□□ -2.11
KTN1-224ENST00000556631 SLFN13Q68D06 897 aa1.9□□□□□ -2.11
KTN1-224ENST00000556631 HMBOX1Q6NT76 420 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms