RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 TPMTP51580 245 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 CLDN10P78369 228 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 CUL4AQ13619 759 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 ENPP2Q13822 863 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 DCAF12L1Q5VU92 463 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 SCARA5Q6ZMJ2 495 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 Q6ZNB5 142 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 DBX2Q6ZNG2 339 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 TADA2BQ86TJ2 420 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 UNC93AQ86WB7 457 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 TMPRSS6Q8IU80 811 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 IQUBQ8NA54 791 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 HNRNPLLQ8WVV9 542 aaKnown RBP12.52□□□□□ -0.41
ACTN1-221ENST00000556571 BHMTQ93088 406 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 SIPA1Q96FS4 1042 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 SDCBP2Q9H190 292 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 IL21RQ9HBE5 538 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 OSER1Q9NX31 292 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 PLK2Q9NYY3 685 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 DNMT3LQ9UJW3 386 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 ZNF510Q9Y2H8 683 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 PCDHA5Q9Y5H7 936 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 CELSR3Q9NYQ7 3312 aa12.52□□□□□ -0.41
ACTN1-221ENST00000556571 KCNJ18B7U540 433 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 FLRT2O43155 660 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 CYP26A1O43174 497 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 PENKP01210 267 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-221ENST00000556571 IGLV3-19P01714 112 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 C4BPAP04003 597 aaKnown RBP12.51□□□□□ -0.41
ACTN1-221ENST00000556571 RPN1P04843 607 aaKnown RBP12.51□□□□□ -0.41
ACTN1-221ENST00000556571 FAM200BP0CF97 657 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 RARGP13631 454 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 SYT1P21579 422 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 CHKAP35790 457 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 CASP4P49662 377 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 NDST1P52848 882 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 MFAP3P55082 362 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 EHHADHQ08426 723 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 SUZ12Q15022 739 aaKnown RBP12.51□□□□□ -0.41
ACTN1-221ENST00000556571 SGSM1Q2NKQ1 1148 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 HLA-BQ31612 363 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 C10orf120Q5SQS8 335 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 UNC13DQ70J99 1090 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 ZNF276Q8N554 614 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 GOLGA5Q8TBA6 731 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 BAHD1Q8TBE0 780 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-221ENST00000556571 PLEKHO2Q8TD55 490 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 RHBDD1Q8TEB9 315 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 PARD3BQ8TEW8 1205 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 PRCCQ92733 491 aaPredicted RBP12.51□□□□□ -0.41
ACTN1-221ENST00000556571 HNRNPABQ99729 332 aaKnown RBP12.51□□□□□ -0.41
ACTN1-221ENST00000556571 C7orf25Q9BPX7 421 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 NUP58Q9BVL2 599 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 NMUR1Q9HB89 426 aa12.51□□□□□ -0.41
ACTN1-221ENST00000556571 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.51□□□□□ -0.41
ACTN1-221ENST00000556571 TFIP11Q9UBB9 837 aaKnown RBP12.51□□□□□ -0.41
ACTN1-221ENST00000556571 FNDC3AQ9Y2H6 1198 aaKnown RBP12.51□□□□□ -0.41
ACTN1-221ENST00000556571 A0A1W2PQH9 124 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 EIF4E1BA6NMX2 242 aaKnown RBP12.5□□□□□ -0.41
ACTN1-221ENST00000556571 LRRIQ3A6PVS8 624 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-221ENST00000556571 MDM4O15151 490 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 STC2O76061 302 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 DKK1O94907 266 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 VNN1O95497 513 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 ACADMP11310 421 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 IL12RB1P42701 662 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 NASPP49321 788 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-221ENST00000556571 PSEN1P49768 467 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 BNC1Q01954 994 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 ORC1Q13415 861 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 STK38Q15208 465 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 GEN1Q17RS7 908 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 KNOP1Q1ED39 458 aaKnown RBP12.5□□□□□ -0.41
ACTN1-221ENST00000556571 CLEC20AQ6ZU45 233 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 GPRIN1Q7Z2K8 1008 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 GALNT15Q8N3T1 639 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 C12orf29Q8N999 325 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 TAF4BQ92750 862 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 DHX58Q96C10 678 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 LRIG1Q96JA1 1093 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 CDK5RAP1Q96SZ6 601 aaKnown RBP12.5□□□□□ -0.41
ACTN1-221ENST00000556571 DCLK3Q9C098 648 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 PCED1AQ9H1Q7 454 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 ZSCAN16Q9H4T2 348 aaPredicted RBP12.5□□□□□ -0.41
ACTN1-221ENST00000556571 PNPLA8Q9NP80 782 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 FAM49BQ9NUQ9 324 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 ELOVL2Q9NXB9 296 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 TOR4AQ9NXH8 423 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 EIF2B4Q9UI10 523 aaKnown RBP12.5□□□□□ -0.41
ACTN1-221ENST00000556571 NAGPAQ9UK23 515 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 NUDT5Q9UKK9 219 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 LOC400499M0QZD8 3231 aa12.5□□□□□ -0.41
ACTN1-221ENST00000556571 SETXQ7Z333 2677 aaKnown RBP12.49□□□□□ -0.41
ACTN1-221ENST00000556571 PLXNB3Q9ULL4 1909 aa12.49□□□□□ -0.41
ACTN1-221ENST00000556571 HHLA1C9JL84 531 aa12.49□□□□□ -0.41
ACTN1-221ENST00000556571 TIMM44O43615 452 aa12.49□□□□□ -0.41
ACTN1-221ENST00000556571 STX6O43752 255 aa12.49□□□□□ -0.41
ACTN1-221ENST00000556571 KLKB1P03952 638 aa12.49□□□□□ -0.41
ACTN1-221ENST00000556571 ATXN1LP0C7T5 689 aaKnown RBP12.49□□□□□ -0.41
ACTN1-221ENST00000556571 RALAP11233 206 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms