RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 SIX6OS1Q8N1H7 587 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 CCDC33Q8N5R6 958 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 ALLCQ8N6M5 410 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 ZNF513Q8N8E2 541 aaPredicted RBP13.21□□□□□ -0.29
SNX6-207ENST00000556303 NAT16Q8N8M0 369 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 MDGA1Q8NFP4 955 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 OLIG1Q8TAK6 271 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 SLC35F5Q8WV83 523 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 IRGQQ8WZA9 623 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 IRX2Q9BZI1 471 aaPredicted RBP13.21□□□□□ -0.29
SNX6-207ENST00000556303 ULBP1Q9BZM6 244 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 DUSP15Q9H1R2 295 aaPredicted RBP13.21□□□□□ -0.29
SNX6-207ENST00000556303 ABCC13Q9NSE7 274 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 DNAJC17Q9NVM6 304 aaKnown RBP13.21□□□□□ -0.29
SNX6-207ENST00000556303 POLR3BQ9NW08 1133 aaPredicted RBP13.21□□□□□ -0.29
SNX6-207ENST00000556303 RASAL2Q9UJF2 1139 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 NUDT5Q9UKK9 219 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 CNTN6Q9UQ52 1028 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 SLC27A6Q9Y2P4 619 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 HBS1LQ9Y450 684 aaKnown RBP13.21□□□□□ -0.29
SNX6-207ENST00000556303 PCDHB4Q9Y5E5 795 aa13.21□□□□□ -0.29
SNX6-207ENST00000556303 EML5Q05BV3 1969 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 TPRP12270 2363 aaKnown RBP13.2□□□□□ -0.3
SNX6-207ENST00000556303 SGK1O00141 431 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 BIN1O00499 593 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 SLC30A4O14863 429 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 MDM4O15151 490 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 ZBTB24O43167 697 aaPredicted RBP13.2□□□□□ -0.3
SNX6-207ENST00000556303 ADAM23O75077 832 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 FBXO21O94952 628 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 CYBBP04839 570 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 CISD3P0C7P0 127 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 HNRNPLP14866 589 aaKnown RBP eCLIP13.2□□□□□ -0.36e-14■□□□□ 8.8
SNX6-207ENST00000556303 NTSR1P30989 418 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 DPP6P42658 865 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 DGKGP49619 791 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 KDSRQ06136 332 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 TRIP4Q15650 581 aaPredicted RBP13.2□□□□□ -0.3
SNX6-207ENST00000556303 C10orf76Q5T2E6 689 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 SDE2Q6IQ49 451 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 ANO7Q6IWH7 933 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 TMEM92Q6UXU6 159 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 TPGS1Q6ZTW0 290 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 BHLHA9Q7RTU4 235 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 FAM217AQ8IXS0 508 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 MLKLQ8NB16 471 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 RNF139Q8WU17 664 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 DDX1Q92499 740 aaKnown RBP13.2□□□□□ -0.3
SNX6-207ENST00000556303 ARRDC1-AS1Q9H2J1 176 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 VPS45Q9NRW7 570 aa13.2□□□□□ -0.3
SNX6-207ENST00000556303 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.2□□□□□ -0.3
SNX6-207ENST00000556303 SLC12A8A0AV02 714 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 GTPBP10A4D1E9 387 aaKnown RBP13.19□□□□□ -0.3
SNX6-207ENST00000556303 TULP2O00295 520 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 KLKB1P03952 638 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 CORO1AP31146 461 aaKnown RBP13.19□□□□□ -0.3
SNX6-207ENST00000556303 P2RY2P41231 377 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 HARS2P49590 506 aaKnown RBP13.19□□□□□ -0.3
SNX6-207ENST00000556303 STX17P56962 302 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 ADIGQ0VDE8 80 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 EMC10Q5UCC4 262 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 FYB2Q5VWT5 728 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 BSPRYQ5W0U4 402 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 PMS2CLQ68D20 193 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 SFTPA1Q8IWL2 248 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 C12orf50Q8NA57 414 aaPredicted RBP13.19□□□□□ -0.3
SNX6-207ENST00000556303 UBA3Q8TBC4 463 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 STK32AQ8WU08 396 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 SPACA7Q96KW9 195 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 GABRG3Q99928 467 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 SLC2A11Q9BYW1 496 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 STOML2Q9UJZ1 356 aa13.19□□□□□ -0.3
SNX6-207ENST00000556303 AGO1Q9UL18 857 aaKnown RBP13.19□□□□□ -0.3
SNX6-207ENST00000556303 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.19□□□□□ -0.3
SNX6-207ENST00000556303 BCLAF3A2AJT9 711 aaKnown RBP13.18□□□□□ -0.3
SNX6-207ENST00000556303 YJEFN3A6XGL0 299 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 E7ENQ6 273 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 RNF225M0QZC1 329 aaPredicted RBP13.18□□□□□ -0.3
SNX6-207ENST00000556303 SART1O43290 800 aaKnown RBP13.18□□□□□ -0.3
SNX6-207ENST00000556303 MED7O43513 233 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 TIMM44O43615 452 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 ZNF217O75362 1048 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 MPLP40238 635 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 ACADSBP45954 432 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 RPL34P49207 117 aaKnown RBP13.18□□□□□ -0.3
SNX6-207ENST00000556303 DAOAP59103 153 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 CT47A1Q5JQC4 288 aaPredicted RBP13.18□□□□□ -0.3
SNX6-207ENST00000556303 PMF1Q6P1K2 205 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 MSANTD2Q6P1R3 559 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 BEND5Q7L4P6 421 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 RRAGAQ7L523 313 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 RBBP8NLQ8NC74 664 aaPredicted RBP13.18□□□□□ -0.3
SNX6-207ENST00000556303 UCMAQ8WVF2 138 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 TFAP2BQ92481 460 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 GOLGA1Q92805 767 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 AZIN2Q96A70 460 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 TRIM62Q9BVG3 475 aa13.18□□□□□ -0.3
SNX6-207ENST00000556303 INTS2Q9H0H0 1204 aaKnown RBP13.18□□□□□ -0.3
SNX6-207ENST00000556303 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.17□□□□□ -0.3
SNX6-207ENST00000556303 M0QYV0 167 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms