RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CILPO75339 1184 aa15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 GFPT1Q06210 699 aaPredicted RBP15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 GEN1Q17RS7 908 aa15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 PREPLQ4J6C6 727 aaPredicted RBP15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 CCDC186Q7Z3E2 898 aa15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 RAB44Q7Z6P3 723 aaPredicted RBP15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 BHMTQ93088 406 aa15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 SNX21Q969T3 373 aa15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 JAKMIP2Q96AA8 810 aa15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 GTPBP2Q9BX10 602 aaKnown RBP15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 MKRN2Q9H000 416 aaKnown RBP15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 TRAF3IP3Q9Y228 551 aa15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 HPSEQ9Y251 543 aa15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 SLC27A6Q9Y2P4 619 aa15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 CABIN1Q9Y6J0 2220 aa15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 TMEM131Q92545 1883 aa15.12■□□□□ 0.01
CHMP4BP1-201ENST00000556017 IGSF10Q6WRI0 2623 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 GFRA2O00451 464 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 MAPK13O15264 365 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 ZNF217O75362 1048 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 PRR29P0C7W0 189 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 TRIM49P0CI25 452 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 TRIM49CP0CI26 452 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 MAOBP27338 520 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 IL12RB1P42701 662 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 ME1P48163 572 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 DGKGP49619 791 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 MFAP3P55082 362 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 BNC1Q01954 994 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 DNM1Q05193 864 aaKnown RBP15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 FUT11Q495W5 492 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 PPP1R26Q5T8A7 1209 aaPredicted RBP15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 TMEM215Q68D42 235 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 BHLHA9Q7RTU4 235 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 METTL3Q86U44 580 aaKnown RBP15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 CHCHD4Q8N4Q1 142 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 ZCCHC14Q8WYQ9 949 aaKnown RBP15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 PIWIL1Q96J94 861 aaKnown RBP15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 XPO6Q96QU8 1125 aaKnown RBP15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 NACA2Q9H009 215 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 SLC32A1Q9H598 525 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 FAM13BQ9NYF5 915 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 USP36Q9P275 1121 aaKnown RBP15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 DNMT3LQ9UJW3 386 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 PCDHA5Q9Y5H7 936 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 STON1Q9Y6Q2 735 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 ADAMTS20P59510 1910 aa15.11■□□□□ 0.01
CHMP4BP1-201ENST00000556017 OPHN1O60890 802 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 PDIA4P13667 645 aaKnown RBP15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 P4HA1P13674 534 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 PIK3CAP42336 1068 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 PLA2G4AP47712 749 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 GCLMP48507 274 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 VAMP7P51809 220 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 NFIL3Q16649 462 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 C10orf120Q5SQS8 335 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 NUDT18Q6ZVK8 323 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 C1orf216Q8TAB5 229 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 DNASE2BQ8WZ79 361 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 SEMA4DQ92854 862 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 NT5C1AQ9BXI3 368 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 DUSP16Q9BY84 665 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 CYP3A43Q9HB55 503 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 EXOC1Q9NV70 894 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 WSB2Q9NYS7 404 aaPredicted RBP15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 CLIC5Q9NZA1 410 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 THAP10Q9P2Z0 257 aaPredicted RBP15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 SLCO1B1Q9Y6L6 691 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 APC2O95996 2303 aa15.1■□□□□ 0.01
CHMP4BP1-201ENST00000556017 A0A1B0GVL5 298 aa15.09■□□□□ 0.01
CHMP4BP1-201ENST00000556017 SH3BP5O60239 455 aa15.09■□□□□ 0.01
CHMP4BP1-201ENST00000556017 CBFA2T3O75081 653 aa15.09■□□□□ 0.01
CHMP4BP1-201ENST00000556017 C7P10643 843 aa15.09■□□□□ 0.01
CHMP4BP1-201ENST00000556017 PFKFB1P16118 471 aa15.09■□□□□ 0.01
CHMP4BP1-201ENST00000556017 COPAP53621 1224 aa15.09■□□□□ 0.01
CHMP4BP1-201ENST00000556017 ZCWPW2Q504Y3 356 aa15.09■□□□□ 0.01
CHMP4BP1-201ENST00000556017 CEP135Q66GS9 1140 aa15.09■□□□□ 0.01
CHMP4BP1-201ENST00000556017 FAM217AQ8IXS0 508 aa15.09■□□□□ 0.01
CHMP4BP1-201ENST00000556017 NIF3L1Q9GZT8 377 aa15.09■□□□□ 0.01
CHMP4BP1-201ENST00000556017 ITM2CQ9NQX7 267 aa15.09■□□□□ 0.01
CHMP4BP1-201ENST00000556017 NAGPAQ9UK23 515 aa15.09■□□□□ 0.01
CHMP4BP1-201ENST00000556017 LSM7Q9UK45 103 aaKnown RBP15.09■□□□□ 0.01
CHMP4BP1-201ENST00000556017 TP53BP1Q12888 1972 aaPredicted RBP15.09■□□□□ 0.01
CHMP4BP1-201ENST00000556017 FAM237AA0A1B0GTK4 181 aa15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 IGLV3-19P01714 112 aa15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 CD58P19256 250 aa15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 CD6P30203 668 aa15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 GRIK2Q13002 908 aa15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 RAB41Q5JT25 222 aa15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 ATL3Q6DD88 541 aa15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 RABEPKQ7Z6M1 372 aa15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 CEP57L1Q8IYX8 460 aa15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 HDDC3Q8N4P3 179 aa15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 SLC4A11Q8NBS3 891 aa15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 TOE1Q96GM8 510 aaKnown RBP15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 ARID3AQ99856 593 aa15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 IL21RQ9HBE5 538 aa15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 AGO1Q9UL18 857 aaKnown RBP15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 ACACAQ13085 2346 aa15.08■□□□□ 0
CHMP4BP1-201ENST00000556017 RHOBTB3O94955 611 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms