RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ZBTB45Q96K62 511 aaPredicted RBP3.94□□□□□ -1.78
SRP54-209ENST00000555746 PKNOX2Q96KN3 472 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 WDR24Q96S15 920 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 RMDN3Q96TC7 470 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 TOR3AQ9H497 397 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 AGO4Q9HCK5 861 aaKnown RBP3.94□□□□□ -1.78
SRP54-209ENST00000555746 OBP2BQ9NPH6 170 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 SERTAD4Q9NUC0 356 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 FOXJ2Q9P0K8 574 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 RIMKLBQ9ULI2 386 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 USP22Q9UPT9 525 aa3.94□□□□□ -1.78
SRP54-209ENST00000555746 DRG1Q9Y295 367 aaKnown RBP3.94□□□□□ -1.78
SRP54-209ENST00000555746 NCOA2Q15596 1464 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 ADCY9O60503 1353 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 LGALS16A8MUM7 142 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 DHHO43323 396 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 SNX2O60749 519 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 CBFA2T3O75081 653 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 NTSR2O95665 410 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 PRKCBP05771 671 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 FESP07332 822 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 C6P13671 934 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 CD19P15391 556 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 NPPBP16860 134 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 RBL1P28749 1068 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 SERPINF1P36955 418 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 GRIA3P42263 894 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 CLCN2P51788 898 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 MRPS35P82673 323 aaKnown RBP3.93□□□□□ -1.78
SRP54-209ENST00000555746 GPS1Q13098 491 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 GRM1Q13255 1194 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 TRIM14Q14142 442 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 ACOX1Q15067 660 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 PDCD2Q16342 344 aaPredicted RBP3.93□□□□□ -1.78
SRP54-209ENST00000555746 PLAC9Q5JTB6 97 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 HECTD2Q5U5R9 776 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 TLDC1Q6P9B6 456 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 MTHFD1LQ6UB35 978 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 DBX2Q6ZNG2 339 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 ZNF551Q7Z340 670 aaPredicted RBP3.93□□□□□ -1.78
SRP54-209ENST00000555746 WDR53Q7Z5U6 358 aaPredicted RBP3.93□□□□□ -1.78
SRP54-209ENST00000555746 GGNQ86UU5 652 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 CAND1Q86VP6 1230 aaKnown RBP3.93□□□□□ -1.78
SRP54-209ENST00000555746 CACNA2D3Q8IZS8 1091 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 RP9Q8TA86 221 aaKnown RBP3.93□□□□□ -1.78
SRP54-209ENST00000555746 IPO4Q8TEX9 1081 aaKnown RBP3.93□□□□□ -1.78
SRP54-209ENST00000555746 ABHD5Q8WTS1 349 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 TFAP2BQ92481 460 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 CAVIN3Q969G5 261 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 CTHRC1Q96CG8 243 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 NUDT22Q9BRQ3 303 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 HERPUD2Q9BSE4 406 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 ALG13Q9NP73 1137 aaKnown RBP3.93□□□□□ -1.78
SRP54-209ENST00000555746 ARHGEF3Q9NR81 526 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 HELLSQ9NRZ9 838 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 LRIT1Q9P2V4 623 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 STEAP1Q9UHE8 339 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 SLC27A6Q9Y2P4 619 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 SLIT1O75093 1534 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 CROCC2H7BZ55 1655 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 CHD2O14647 1828 aaKnown RBP3.93□□□□□ -1.78
SRP54-209ENST00000555746 SAMD9LQ8IVG5 1584 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 SALL3Q9BXA9 1300 aa3.93□□□□□ -1.78
SRP54-209ENST00000555746 UBR1Q8IWV7 1749 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 A0A0C4DFX4 3053 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 ASXL1Q8IXJ9 1541 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 LOC102724159A0A0B4J2E5 919 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 hCG_1642624A0A1W2PR95 340 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 AQP12BA6NM10 295 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 A8MVJ9 347 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 PSMD9O00233 223 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 EXOC5O00471 708 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 PIP5K1BO14986 540 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 FOXN1O15353 648 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 URI1O94763 535 aaPredicted RBP3.92□□□□□ -1.78
SRP54-209ENST00000555746 VNN1O95497 513 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 VIPP01282 170 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 NR2F6P10588 404 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 JUPP14923 745 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 NTSR1P30989 418 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 GKP32189 559 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 ACVRL1P37023 503 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 GRK6P43250 576 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 MTHFSP49914 203 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 ZNF169Q14929 603 aaPredicted RBP3.92□□□□□ -1.78
SRP54-209ENST00000555746 PWP2Q15269 919 aaKnown RBP3.92□□□□□ -1.78
SRP54-209ENST00000555746 ELF2Q15723 593 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 CYP1B1Q16678 543 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 CCDC38Q502W7 563 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 ARHGAP15Q53QZ3 475 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 TANGO2Q6ICL3 276 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 ANKRD16Q6P6B7 361 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 CCDC174Q6PII3 467 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 PEG10Q86TG7 708 aaKnown RBP3.92□□□□□ -1.78
SRP54-209ENST00000555746 LDLRAD3Q86YD5 345 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 ACTRT2Q8TDY3 377 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 NEU4Q8WWR8 484 aaPredicted RBP3.92□□□□□ -1.78
SRP54-209ENST00000555746 RSC1A1Q92681 617 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 R3HDM4Q96D70 268 aa3.92□□□□□ -1.78
SRP54-209ENST00000555746 HAPLN3Q96S86 360 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms