RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 SPDL1Q96EA4 605 aa16.74■□□□□ 0.27
TUBB3-209ENST00000555609 FGD4Q96M96 766 aa16.74■□□□□ 0.27
TUBB3-209ENST00000555609 DNAI2Q9GZS0 605 aa16.74■□□□□ 0.27
TUBB3-209ENST00000555609 PLAC1Q9HBJ0 212 aa16.74■□□□□ 0.27
TUBB3-209ENST00000555609 THAP1Q9NVV9 213 aa16.74■□□□□ 0.27
TUBB3-209ENST00000555609 HEY1Q9Y5J3 304 aa16.74■□□□□ 0.27
TUBB3-209ENST00000555609 FAM237BA0A1B0GVD1 139 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 SPECC1L-ADORA2AF8WAN1 911 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 PPP1R12AO14974 1030 aaPredicted RBP16.73■□□□□ 0.27
TUBB3-209ENST00000555609 CNMDO75829 334 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 ALDH1A2O94788 518 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 PAX7P23759 505 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 CYP2F1P24903 491 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 NRLP54845 237 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 AP1B1Q10567 949 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 KPNB1Q14974 876 aaKnown RBP16.73■□□□□ 0.27
TUBB3-209ENST00000555609 RCN1Q15293 331 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 CDO1Q16878 200 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 ARHGAP17Q68EM7 881 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 CDR2LQ86X02 465 aaPredicted RBP16.73■□□□□ 0.27
TUBB3-209ENST00000555609 KIRREL3Q8IZU9 778 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 ARMC2Q8NEN0 867 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 SLC35F5Q8WV83 523 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 QKIQ96PU8 341 aaKnown RBP eCLIP16.73■□□□□ 0.27
TUBB3-209ENST00000555609 NMUR2Q9GZQ4 415 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 NGRNQ9NPE2 291 aaKnown RBP16.73■□□□□ 0.27
TUBB3-209ENST00000555609 MOCS1Q9NZB8 636 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 GPRC5DQ9NZD1 345 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 RNF181Q9P0P0 153 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 HESX1Q9UBX0 185 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 ANGPTL2Q9UKU9 493 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 CSADQ9Y600 493 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 A0A0G2JLL6 359 aaPredicted RBP16.73■□□□□ 0.27
TUBB3-209ENST00000555609 A6NJR5 290 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 H0Y3Z8 333 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 CXCL11O14625 94 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 CIB2O75838 187 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 SERPINA6P08185 405 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 STX3Q13277 289 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 LAMC2Q13753 1193 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 KCTD2Q14681 263 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 CHI3L2Q15782 390 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 TRMT5Q32P41 509 aaKnown RBP16.73■□□□□ 0.27
TUBB3-209ENST00000555609 SNX30Q5VWJ9 437 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 C9orf131Q5VYM1 1079 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 MARK2Q7KZI7 788 aaKnown RBP16.73■□□□□ 0.27
TUBB3-209ENST00000555609 PRRT2Q7Z6L0 340 aaPredicted RBP16.73■□□□□ 0.27
TUBB3-209ENST00000555609 TRPM4Q8TD43 1214 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 TRAPPC12Q8WVT3 735 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 KHSRPQ92945 711 aaKnown RBP eCLIP16.73■□□□□ 0.27
TUBB3-209ENST00000555609 NAT9Q9BTE0 207 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 ASCC2Q9H1I8 757 aaPredicted RBP16.73■□□□□ 0.27
TUBB3-209ENST00000555609 VCXQ9H320 206 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 EIF2B3Q9NR50 452 aaKnown RBP16.73■□□□□ 0.27
TUBB3-209ENST00000555609 RCOR3Q9P2K3 495 aaPredicted RBP16.73■□□□□ 0.27
TUBB3-209ENST00000555609 MORF4L1Q9UBU8 362 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 ZSWIM8A7E2V4 1837 aa16.73■□□□□ 0.27
TUBB3-209ENST00000555609 ASB14A6NK59 587 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 B2RBV5 119 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 GJB1P08034 283 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 TXNP10599 105 aaKnown RBP16.72■□□□□ 0.27
TUBB3-209ENST00000555609 GRM5P41594 1212 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 MTM1Q13496 603 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 DCAF4L1Q3SXM0 396 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 TRIM68Q6AZZ1 485 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 LRRC74BQ6ZQY2 392 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 PSTKQ8IV42 348 aaKnown RBP16.72■□□□□ 0.27
TUBB3-209ENST00000555609 NDUFAF2Q8N183 169 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 PDCD7Q8N8D1 485 aaKnown RBP16.72■□□□□ 0.27
TUBB3-209ENST00000555609 STKLD1Q8NE28 680 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 CDKL2Q92772 493 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 MMP19Q99542 508 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 C11orf84Q9BUA3 381 aaPredicted RBP16.72■□□□□ 0.27
TUBB3-209ENST00000555609 GPAMQ9HCL2 828 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 ARHGEF4Q9NR80 690 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 SMYD2Q9NRG4 433 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 NMRK1Q9NWW6 199 aa16.72■□□□□ 0.27
TUBB3-209ENST00000555609 HBS1LQ9Y450 684 aaKnown RBP16.72■□□□□ 0.27
TUBB3-209ENST00000555609 A0A087WZ62 844 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 NEBLO76041 1014 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 TM7SF2O76062 418 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 NPTXRO95502 500 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 CSH1P0DML2 217 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 CSH2P0DML3 217 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 ARF4P18085 180 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-209ENST00000555609 L1CAMP32004 1257 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 RPL34P49207 117 aaKnown RBP16.71■□□□□ 0.27
TUBB3-209ENST00000555609 HDAC4P56524 1084 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 IRX1P78414 480 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-209ENST00000555609 INSCQ1MX18 579 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 PMF1Q6P1K2 205 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 GADL1Q6ZQY3 521 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 ZNF534Q76KX8 674 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 ARID3BQ8IVW6 561 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-209ENST00000555609 DEPDC1BQ8WUY9 529 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 ATP2A3Q93084 1043 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 FAM136AQ96C01 138 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 FERMT1Q9BQL6 677 aa16.71■□□□□ 0.27
TUBB3-209ENST00000555609 FDXACB1Q9BRP7 624 aaPredicted RBP16.71■□□□□ 0.27
TUBB3-209ENST00000555609 CCDC106Q9BWC9 280 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms