RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ARL5CA6NH57 179 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 CCT8L1PA6NM43 557 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 NRP1O14786 923 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 METTL18O95568 372 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 THP07101 528 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 ACTN3Q08043 901 aaPredicted RBP25.18■■□□□ 1.62
TMEM260-207ENST00000555497 BNIPLQ7Z465 357 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 CAND1Q86VP6 1230 aaKnown RBP25.18■■□□□ 1.62
TMEM260-207ENST00000555497 NT5C3BQ969T7 300 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 SGSM3Q96HU1 749 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 SMC6Q96SB8 1091 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 PAIP2Q9BPZ3 127 aaKnown RBP25.18■■□□□ 1.62
TMEM260-207ENST00000555497 SLC38A7Q9NVC3 462 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 DTLQ9NZJ0 730 aa25.18■■□□□ 1.62
TMEM260-207ENST00000555497 SYNJ2BP-COX16A0A087WUM0 186 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 TYROBPO43914 113 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 FAM163BP0C2L3 166 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 SCNN1GP51170 649 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 CACNA2D1P54289 1103 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 KLHL38Q2WGJ6 581 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 CGB2Q6NT52 195 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 PACS2Q86VP3 889 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 CDKL3Q8IVW4 592 aaPredicted RBP25.17■■□□□ 1.62
TMEM260-207ENST00000555497 NETO2Q8NC67 525 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 NPY6RQ99463 290 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 LRRC4Q9HBW1 653 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 KRT82Q9NSB4 513 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 COX16Q9P0S2 106 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 TSC2P49815 1807 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 TCRBV9S1A1TA0A576 114 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 MYBPHLA2RUH7 354 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 TSHRP16473 764 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 MAGEA6P43360 314 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 SLC8A3P57103 927 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 CBLBQ13191 982 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 XRCC4Q13426 336 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 SLC1A5Q15758 541 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 RSPH3Q86UC2 560 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 ANKS4BQ8N8V4 417 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 RNF169Q8NCN4 708 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 SMOQ99835 787 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 SENP1Q9P0U3 644 aa25.17■■□□□ 1.62
TMEM260-207ENST00000555497 FYNP06241 537 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 APRTP07741 180 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 ZFXP17010 805 aaPredicted RBP25.16■■□□□ 1.62
TMEM260-207ENST00000555497 TKTL1P51854 596 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 LACTB2Q53H82 288 aaPredicted RBP25.16■■□□□ 1.62
TMEM260-207ENST00000555497 GPRIN1Q7Z2K8 1008 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 QKIQ96PU8 341 aaKnown RBP eCLIP25.16■■□□□ 1.624e-10■■■■■ 29.8
TMEM260-207ENST00000555497 KCNK16Q96T55 309 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 SYT15Q9BQS2 421 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 PLAC1Q9HBJ0 212 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 CHST12Q9NRB3 414 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 CASTOR2A6NHX0 329 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 MGEA5O60502 916 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 KRT4P19013 534 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 NOS2P35228 1153 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 NR2C2P49116 596 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 FLT3LGP49771 235 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 SLC18A1P54219 525 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 MFSD14CQ5VZR4 134 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 ZMIZ2Q8NF64 920 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 SLC2A13Q96QE2 648 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 KLC2Q9H0B6 622 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 KDM4CQ9H3R0 1056 aa25.16■■□□□ 1.62
TMEM260-207ENST00000555497 GCATO75600 419 aa25.15■■□□□ 1.62
TMEM260-207ENST00000555497 FAM200BP0CF97 657 aa25.15■■□□□ 1.62
TMEM260-207ENST00000555497 MSH2P43246 934 aa25.15■■□□□ 1.62
TMEM260-207ENST00000555497 YWHAGP61981 247 aaKnown RBP eCLIP25.15■■□□□ 1.62
TMEM260-207ENST00000555497 IL9RQ01113 521 aa25.15■■□□□ 1.62
TMEM260-207ENST00000555497 CAP1Q01518 475 aa25.15■■□□□ 1.62
TMEM260-207ENST00000555497 CTU1Q7Z7A3 348 aaKnown RBP25.15■■□□□ 1.62
TMEM260-207ENST00000555497 PRPF39Q86UA1 669 aaKnown RBP25.15■■□□□ 1.62
TMEM260-207ENST00000555497 PCED1BQ96HM7 432 aa25.15■■□□□ 1.62
TMEM260-207ENST00000555497 ULBP1Q9BZM6 244 aa25.15■■□□□ 1.62
TMEM260-207ENST00000555497 SMG5Q9UPR3 1016 aaKnown RBP25.15■■□□□ 1.62
TMEM260-207ENST00000555497 M0QYT0 321 aa25.14■■□□□ 1.62
TMEM260-207ENST00000555497 DGKIO75912 1065 aa25.14■■□□□ 1.62
TMEM260-207ENST00000555497 C1QAP02745 245 aa25.14■■□□□ 1.62
TMEM260-207ENST00000555497 VAV1P15498 845 aa25.14■■□□□ 1.62
TMEM260-207ENST00000555497 CA4P22748 312 aa25.14■■□□□ 1.62
TMEM260-207ENST00000555497 KBTBD12Q3ZCT8 623 aa25.14■■□□□ 1.62
TMEM260-207ENST00000555497 FAM35AQ86V20 835 aa25.14■■□□□ 1.62
TMEM260-207ENST00000555497 SIX6OS1Q8N1H7 587 aa25.14■■□□□ 1.62
TMEM260-207ENST00000555497 SPOCK2Q92563 424 aa25.14■■□□□ 1.62
TMEM260-207ENST00000555497 CFAP36Q96G28 342 aa25.14■■□□□ 1.62
TMEM260-207ENST00000555497 CYTH2Q99418 400 aa25.14■■□□□ 1.62
TMEM260-207ENST00000555497 ARHGEF4Q9NR80 690 aa25.14■■□□□ 1.62
TMEM260-207ENST00000555497 USP15Q9Y4E8 981 aaPredicted RBP25.14■■□□□ 1.62
TMEM260-207ENST00000555497 ADAMTS4O75173 837 aa25.14■■□□□ 1.61
TMEM260-207ENST00000555497 CD52P31358 61 aa25.14■■□□□ 1.61
TMEM260-207ENST00000555497 NME3Q13232 169 aa25.14■■□□□ 1.61
TMEM260-207ENST00000555497 DSTYKQ6XUX3 929 aa25.14■■□□□ 1.61
TMEM260-207ENST00000555497 ZNF534Q76KX8 674 aa25.14■■□□□ 1.61
TMEM260-207ENST00000555497 OLFM3Q96PB7 478 aa25.14■■□□□ 1.61
TMEM260-207ENST00000555497 POPDC2Q9HBU9 364 aa25.14■■□□□ 1.61
TMEM260-207ENST00000555497 PIGVQ9NUD9 493 aa25.14■■□□□ 1.61
TMEM260-207ENST00000555497 YJEFN3A6XGL0 299 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 E7ENQ6 273 aa25.13■■□□□ 1.61
TMEM260-207ENST00000555497 I3L4J1 428 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms