RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 ZFRQ96KR1 1074 aaKnown RBP14.9□□□□□ -0.02
CHD8-208ENST00000555301 PPP1R9BQ96SB3 815 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 PACSIN1Q9BY11 444 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 FAM204AQ9H8W3 233 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 UVRAGQ9P2Y5 699 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 CCL26Q9Y258 94 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 PCDHA13Q9Y5I0 950 aa14.9□□□□□ -0.02
CHD8-208ENST00000555301 C2orf16Q68DN1 1984 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 TMEM191CA6NGB0 347 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 C19orf67A6NJJ6 358 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 HEPACAM2A8MVW5 462 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 M0QYT0 321 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 LEFTY2O00292 366 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 GJB6O95452 261 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 F9P00740 461 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 IGLV3-25P01717 112 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 PTPN9P43378 593 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 SULT1E1P49888 294 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 RPL7AP62424 266 aaKnown RBP14.89□□□□□ -0.03
CHD8-208ENST00000555301 RING1Q06587 406 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 USP4Q13107 963 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 TRIP4Q15650 581 aaPredicted RBP14.89□□□□□ -0.03
CHD8-208ENST00000555301 ZNF77Q15935 545 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 MFSD6LQ8IWD5 586 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 RHOT2Q8IXI1 618 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 FNIP1Q8TF40 1166 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 PLD4Q96BZ4 506 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 PGAP3Q96FM1 320 aaPredicted RBP14.89□□□□□ -0.03
CHD8-208ENST00000555301 CFAP57Q96MR6 1250 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 NPY6RQ99463 290 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 KCNK12Q9HB15 430 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 GKN1Q9NS71 199 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 THG1LQ9NWX6 298 aaKnown RBP14.89□□□□□ -0.03
CHD8-208ENST00000555301 DDIT4Q9NX09 232 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 LIMD1Q9UGP4 676 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 LCMT1Q9UIC8 334 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 LSM7Q9UK45 103 aaKnown RBP14.89□□□□□ -0.03
CHD8-208ENST00000555301 TLR6Q9Y2C9 796 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 SH3BP1Q9Y3L3 701 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 NUMBLQ9Y6R0 609 aa14.89□□□□□ -0.03
CHD8-208ENST00000555301 GREB1Q4ZG55 1949 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 COL6A3P12111 3177 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 E2F8A0AVK6 867 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 IRAK2O43187 625 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 SLC2A3P11169 496 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 PSMC3P17980 439 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 HARS2P49590 506 aaKnown RBP14.88□□□□□ -0.03
CHD8-208ENST00000555301 ZNF143P52747 638 aaPredicted RBP14.88□□□□□ -0.03
CHD8-208ENST00000555301 TBX4P57082 545 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 CCZ1BP86790 482 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 CCZ1P86791 482 aaPredicted RBP14.88□□□□□ -0.03
CHD8-208ENST00000555301 ZXDBP98169 803 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 MTA1Q13330 715 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 CCDC14Q49A88 953 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 NUGGCQ68CJ6 796 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 TRNP1Q6NT89 227 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 CC2D1AQ6P1N0 951 aaPredicted RBP14.88□□□□□ -0.03
CHD8-208ENST00000555301 SND1Q7KZF4 910 aaKnown RBP eCLIP14.88□□□□□ -0.03
CHD8-208ENST00000555301 STRADAQ7RTN6 431 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 UNC45BQ8IWX7 931 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 YAF2Q8IY57 180 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 ADAM32Q8TC27 787 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 ARHGEF26Q96DR7 871 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 CNPY3Q9BT09 278 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 NUP85Q9BW27 656 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 DCLK3Q9C098 648 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 CTTNBP2NLQ9P2B4 639 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 CFAP97Q9P2B7 532 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 ZNF510Q9Y2H8 683 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 PAXBP1Q9Y5B6 917 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 NOTCH4Q99466 2003 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 BRWD1Q9NSI6 2320 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 PRUNE2Q8WUY3 3088 aa14.88□□□□□ -0.03
CHD8-208ENST00000555301 DENND4AQ7Z401 1863 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 SLC9A3R1O14745 358 aaPredicted RBP14.87□□□□□ -0.03
CHD8-208ENST00000555301 MSI1O43347 362 aaKnown RBP14.87□□□□□ -0.03
CHD8-208ENST00000555301 STC2O76061 302 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 ENDOD1O94919 500 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 IGLV3-27P01718 113 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 HMBSP08397 361 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 IRF1P10914 325 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 CCR1P32246 355 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 RDXP35241 583 aaKnown RBP14.87□□□□□ -0.03
CHD8-208ENST00000555301 VAV2P52735 878 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 PITX1P78337 314 aaPredicted RBP14.87□□□□□ -0.03
CHD8-208ENST00000555301 DEUP1Q05D60 604 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 FCHO2Q0JRZ9 810 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 NME3Q13232 169 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 EIF4EBP2Q13542 120 aaPredicted RBP14.87□□□□□ -0.03
CHD8-208ENST00000555301 TCEAL1Q15170 157 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 VITQ6UXI7 678 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 HTR3DQ70Z44 454 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 BNIPLQ7Z465 357 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 ACRBPQ8NEB7 543 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 TTC16Q8NEE8 873 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 ZNF564Q8TBZ8 553 aaPredicted RBP14.87□□□□□ -0.03
CHD8-208ENST00000555301 ADAMTS19Q8TE59 1207 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 RFFLQ8WZ73 363 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 RNF34Q969K3 372 aa14.87□□□□□ -0.03
CHD8-208ENST00000555301 RSPRY1Q96DX4 576 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms