RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 FOXF2Q12947 444 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 PTK2BQ14289 1009 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 CLCA4Q14CN2 919 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 PROSER3Q2NL68 480 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 TBC1D25Q3MII6 688 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 PCID2Q5JVF3 399 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 FAXCQ5TGI0 409 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 USP17L6PQ6QN14 398 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 MTHFD1LQ6UB35 978 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 SRRM1Q8IYB3 904 aaKnown RBP3.62□□□□□ -1.83
SCFD1-213ENST00000554776 C11orf44Q8N8P7 122 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 SEMA6DQ8NFY4 1073 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 FAM71BQ8TC56 605 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 RILPL2Q969X0 211 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 HIST1H2AAQ96QV6 131 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 FAM167BQ9BTA0 163 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 TMEM120AQ9BXJ8 343 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 EIF2AQ9BY44 585 aaKnown RBP3.62□□□□□ -1.83
SCFD1-213ENST00000554776 ZBTB26Q9HCK0 441 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 RRN3Q9NYV6 651 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 SLC27A6Q9Y2P4 619 aa3.62□□□□□ -1.83
SCFD1-213ENST00000554776 HMX3A6NHT5 357 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 AP4M1O00189 453 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 PSMD9O00233 223 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 EXOC5O00471 708 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 DNPH1O43598 174 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 CBFA2T3O75081 653 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 PYGLP06737 847 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 FPR3P25089 353 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 KLRK1P26718 216 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 MCM5P33992 734 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 SUMO2P61956 95 aaKnown RBP3.61□□□□□ -1.83
SCFD1-213ENST00000554776 RNASE12Q5GAN4 147 aaKnown RBP3.61□□□□□ -1.83
SCFD1-213ENST00000554776 ABLIM2Q6H8Q1 611 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 MRNIPQ6NTE8 343 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 KIRREL2Q6UWL6 708 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 PTCHD4Q6ZW05 846 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 RAB11FIP4Q86YS3 637 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 SIRT6Q8N6T7 355 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 PAF1Q8N7H5 531 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 ABHD11Q8NFV4 315 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 STT3BQ8TCJ2 826 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 TRAPPC12Q8WVT3 735 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 RUBCNQ92622 972 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 WDR24Q96S15 920 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 DPCDQ9BVM2 203 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-213ENST00000554776 ZCWPW1Q9H0M4 648 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 TMEM8AQ9HCN3 771 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 NECTIN3Q9NQS3 549 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 VPS45Q9NRW7 570 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 SH3BP4Q9P0V3 963 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 CCNL1Q9UK58 526 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-213ENST00000554776 GTF2A1LQ9UNN4 478 aa3.61□□□□□ -1.83
SCFD1-213ENST00000554776 OR2W5A6NFC9 320 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 A8MVJ9 347 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 B9A039 149 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 H7C1Q1 480 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 PCDH17O14917 1159 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 PDE8BO95263 885 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 LATS1O95835 1130 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 NHLRC4P0CG21 123 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-213ENST00000554776 DIO1P49895 249 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 PNLIPRP1P54315 467 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 HOXA4Q00056 320 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-213ENST00000554776 SLC10A2Q12908 348 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-213ENST00000554776 GPS1Q13098 491 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 MTAPQ13126 283 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 PPFIA1Q13136 1202 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 SLC5A9Q2M3M2 681 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 L1TD1Q5T7N2 865 aaKnown RBP3.6□□□□□ -1.83
SCFD1-213ENST00000554776 LVRNQ6Q4G3 990 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 KLHL17Q6TDP4 642 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 CLEC9AQ6UXN8 241 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 NAPRTQ6XQN6 538 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 TRIM72Q6ZMU5 477 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 ZNF782Q6ZMW2 699 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-213ENST00000554776 RRAGAQ7L523 313 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 MOGAT3Q86VF5 341 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 KRT73Q86Y46 540 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 SFTPA1Q8IWL2 248 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 CLASRPQ8N2M8 674 aaKnown RBP3.6□□□□□ -1.83
SCFD1-213ENST00000554776 GALNT15Q8N3T1 639 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 LINC01465Q8N7H1 131 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 SCAMP5Q8TAC9 235 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 SUN3Q8TAQ9 357 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 CSGALNACT1Q8TDX6 532 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 GRAMD1AQ96CP6 724 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 ISCA1Q9BUE6 129 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 KATNAL1Q9BW62 490 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 ASIC5Q9NY37 505 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 FLRT1Q9NZU1 646 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 LPAR3Q9UBY5 353 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 SRP68Q9UHB9 627 aaKnown RBP3.6□□□□□ -1.83
SCFD1-213ENST00000554776 STEAP1Q9UHE8 339 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 AMFRQ9UKV5 643 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 PNMA2Q9UL42 364 aa3.6□□□□□ -1.83
SCFD1-213ENST00000554776 TISP43B9A030 160 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 J3KTA2 159 aa3.59□□□□□ -1.83
SCFD1-213ENST00000554776 EIF3FO00303 357 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-213ENST00000554776 CES2O00748 559 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms