RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 GPR32O75388 356 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 RFPL3O75679 317 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 GCFC2P16383 781 aaKnown RBP4.64□□□□□ -1.67
VTI1B-203ENST00000554636 TACR2P21452 398 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 KLRC1P26715 233 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 SFNP31947 248 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 KRT2P35908 639 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 PRKCEQ02156 737 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 FOXL1Q12952 345 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 DUSP8Q13202 625 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 PPP2R5CQ13362 524 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 MYBPC3Q14896 1274 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 NONOQ15233 471 aaKnown RBP eCLIP4.64□□□□□ -1.67
VTI1B-203ENST00000554636 TMEM266Q2M3C6 531 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 LETM2Q2VYF4 491 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 NRN1LQ496H8 165 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 USP39Q53GS9 565 aaKnown RBP4.64□□□□□ -1.67
VTI1B-203ENST00000554636 PPP4R3AQ6IN85 833 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 KLHDC10Q6PID8 442 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 PIK3AP1Q6ZUJ8 805 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 POLNQ7Z5Q5 900 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 NEK8Q86SG6 692 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 LRRTM3Q86VH5 581 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 FAM228AQ86W67 206 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 NME8Q8N427 588 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 CHTF18Q8WVB6 975 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 WASF1Q92558 559 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 HAS1Q92839 578 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 GCDHQ92947 438 aaPredicted RBP4.64□□□□□ -1.67
VTI1B-203ENST00000554636 TNPO1Q92973 898 aaKnown RBP4.64□□□□□ -1.67
VTI1B-203ENST00000554636 ZNF689Q96CS4 500 aaPredicted RBP4.64□□□□□ -1.67
VTI1B-203ENST00000554636 FAM167AQ96KS9 214 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 RPL10LQ96L21 214 aaKnown RBP4.64□□□□□ -1.67
VTI1B-203ENST00000554636 C16orf92Q96LL3 132 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 CEP89Q96ST8 783 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 YME1L1Q96TA2 773 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 C17orf80Q9BSJ5 609 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 SCAND2PQ9GZW5 306 aaPredicted RBP4.64□□□□□ -1.67
VTI1B-203ENST00000554636 POFUT1Q9H488 388 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 PLA2G3Q9NZ20 509 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 THEGQ9P2T0 379 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 TCEAL9Q9UHQ7 104 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 NOC2LQ9Y3T9 749 aaKnown RBP4.64□□□□□ -1.67
VTI1B-203ENST00000554636 INSL6Q9Y581 213 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 SLC30A1Q9Y6M5 507 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 ARID2Q68CP9 1835 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 ADGRA3Q8IWK6 1321 aa4.64□□□□□ -1.67
VTI1B-203ENST00000554636 FNDC1Q4ZHG4 1894 aaPredicted RBP4.64□□□□□ -1.67
VTI1B-203ENST00000554636 MUC3AQ02505 3323 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 IGKV6-21A0A0C4DH24 114 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 CCDC194A0A1B0GVG4 234 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 TMEM150BA6NC51 233 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 M0QZ92 97 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 ENPP3O14638 875 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 TBX3O15119 743 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 MAGEB2O15479 319 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 MGEA5O60502 916 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 H2AFYO75367 372 aaKnown RBP4.63□□□□□ -1.67
VTI1B-203ENST00000554636 MMP1P03956 469 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 VTNP04004 478 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 CYP17A1P05093 508 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 XBP1P17861 261 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 RPS19P39019 145 aaKnown RBP4.63□□□□□ -1.67
VTI1B-203ENST00000554636 GATMP50440 423 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 GPC3P51654 580 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 CLCN3P51790 818 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 CRYBB1P53674 252 aaPredicted RBP4.63□□□□□ -1.67
VTI1B-203ENST00000554636 HGFACQ04756 655 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 DRP2Q13474 957 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 RIN1Q13671 783 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 GRM7Q14831 915 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 EPC2Q52LR7 807 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 PLA2G4FQ68DD2 849 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 Q6ZSN1 163 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 MIER3Q7Z3K6 550 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 CCDC83Q8IWF9 413 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 DIS3L2Q8IYB7 885 aaKnown RBP4.63□□□□□ -1.67
VTI1B-203ENST00000554636 CMTR2Q8IYT2 770 aaKnown RBP4.63□□□□□ -1.67
VTI1B-203ENST00000554636 LRRC71Q8N4P6 559 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 ANKRD53Q8N9V6 530 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 SLC16A11Q8NCK7 471 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 PPM1EQ8WY54 764 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 EXTL1Q92935 676 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 DYDC2Q96IM9 177 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 FAM20AQ96MK3 541 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 ZNF747Q9BV97 191 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 FTHL17Q9BXU8 183 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 TLR9Q9NR96 1032 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 INTS7Q9NVH2 962 aaKnown RBP4.63□□□□□ -1.67
VTI1B-203ENST00000554636 WRAP73Q9P2S5 460 aaPredicted RBP4.63□□□□□ -1.67
VTI1B-203ENST00000554636 MTUS1Q9ULD2 1270 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 PADI3Q9ULW8 664 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 LIMCH1Q9UPQ0 1083 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 TCF20Q9UGU0 1960 aaKnown RBP4.63□□□□□ -1.67
VTI1B-203ENST00000554636 XIRP2A4UGR9 3374 aa4.63□□□□□ -1.67
VTI1B-203ENST00000554636 A0A1W2PRX2 142 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 CAPN14A8MX76 684 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 BTBD18B2RXH4 712 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 C5orf67F2Z3F1 127 aa4.62□□□□□ -1.67
VTI1B-203ENST00000554636 H3BNC9 293 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms