RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 OSMRQ99650 979 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 CADM1Q9BY67 442 aaKnown RBP16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 TRIM6Q9C030 488 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 NXF3Q9H4D5 531 aaKnown RBP16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 GOLGA2P5Q9HBQ8 144 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 IL1RAPL1Q9NZN1 696 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 KIAA1257Q9ULG3 409 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 E2F8A0AVK6 867 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 GYG2O15488 501 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 SPAG6O75602 509 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 DLDP09622 509 aaKnown RBP16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 GOT1P17174 413 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 L1CAMP32004 1257 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 MRPS5P82675 430 aaKnown RBP16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 CDK16Q00536 496 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 KCTD15Q96SI1 283 aaPredicted RBP16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 LGMNQ99538 433 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 SLC4A5Q9BY07 1137 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 RNF181Q9P0P0 153 aa16.24■□□□□ 0.19
ARHGEF40-203ENST00000554514 BCLAF3A2AJT9 711 aaKnown RBP16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 C1QAP02745 245 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 SESN2P58004 480 aaPredicted RBP16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 BST1Q10588 318 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 RCN2Q14257 317 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 MAMDC4Q6UXC1 1216 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 DSTYKQ6XUX3 929 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 RINLQ6ZS11 566 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 CDKL3Q8IVW4 592 aaPredicted RBP16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 ZNF408Q9H9D4 720 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 GJD2Q9UKL4 321 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 DNAH12Q6ZR08 3092 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 ESRRAP11474 423 aaPredicted RBP16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 PPIL2Q13356 520 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 MARCH8Q5T0T0 291 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 CES4AQ5XG92 561 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 HEATR6Q6AI08 1181 aaKnown RBP16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 APBB1IPQ7Z5R6 666 aaPredicted RBP16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 TMEM110Q86TL2 294 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 CHSY1Q86X52 802 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 NUDCD3Q8IVD9 361 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 PPTC7Q8NI37 304 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 MCUR1Q96AQ8 359 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 PGLYRP2Q96PD5 576 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 ZNF670Q9BS34 389 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 NMUR2Q9GZQ4 415 aa16.23■□□□□ 0.19
ARHGEF40-203ENST00000554514 WDR27A2RRH5 827 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 FCHO1O14526 889 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 SKAP2O75563 359 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 RFPL1O75677 317 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 CALB2P22676 271 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 GRM5P41594 1212 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 PKDCCQ504Y2 493 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 LGSNQ5TDP6 509 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 C16orf46Q6P387 395 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 ZNF534Q76KX8 674 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 FASTKD5Q7L8L6 764 aaKnown RBP16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 STK32AQ8WU08 396 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 TEKT4Q8WW24 435 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 OXNAD1Q96HP4 312 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 FAXDC2Q96IV6 333 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 NSL1Q96IY1 281 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 TBCBQ99426 244 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 SLC5A4Q9NY91 659 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 PPARGC1AQ9UBK2 798 aaKnown RBP16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 KCNH4Q9UQ05 1017 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 MTO1Q9Y2Z2 717 aaKnown RBP16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 PLLPQ9Y342 182 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 DPYSL4O14531 572 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 ENO1P06733 434 aaKnown RBP16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 GJA5P36382 358 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 RABGGTBP53611 331 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 POU5F1BQ06416 359 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 STILQ15468 1287 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 ZNF398Q8TD17 642 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 SLC2A14Q8TDB8 520 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 E2F7Q96AV8 911 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 CSPG4P5Q96PW8 444 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 SAR1AQ9NR31 198 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 MAGED2Q9UNF1 606 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 MDM4O15151 490 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 CCDC22O60826 627 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 KRT38O76015 456 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 WFS1O76024 890 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 F7P08709 466 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 TPBGLP0DKB5 382 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 HOXA11P31270 313 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 AP1B1Q10567 949 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 KHDC1Q4VXA5 237 aaKnown RBP16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 IFNLR1Q8IU57 520 aaPredicted RBP16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 SKA1Q96BD8 255 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 SIGLEC10Q96LC7 697 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 BTBD10Q9BSF8 475 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 CNTN3Q9P232 1028 aa16.22■□□□□ 0.19
ARHGEF40-203ENST00000554514 RECQL4O94761 1208 aa16.21■□□□□ 0.19
ARHGEF40-203ENST00000554514 PITX1P78337 314 aaPredicted RBP16.21■□□□□ 0.19
ARHGEF40-203ENST00000554514 KYAT1Q16773 422 aa16.21■□□□□ 0.19
ARHGEF40-203ENST00000554514 CES3Q6UWW8 571 aa16.21■□□□□ 0.19
ARHGEF40-203ENST00000554514 BZW1Q7L1Q6 419 aaKnown RBP16.21■□□□□ 0.19
ARHGEF40-203ENST00000554514 CCNYQ8ND76 341 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms