RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 PCDHB4Q9Y5E5 795 aa10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 TPRP12270 2363 aaKnown RBP10.92□□□□□ -0.66
PTCD2P1-201ENST00000554393 GTPBP10A4D1E9 387 aaKnown RBP10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 TULP2O00295 520 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 TULP3O75386 442 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 RPP40O75818 363 aaKnown RBP10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 PRKCSHP14314 528 aaPredicted RBP10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 KIR2DL1P43626 348 aaPredicted RBP10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 SLC6A11P48066 632 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 DGKEP52429 567 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 PRR23BQ6ZRT6 265 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 RSRC2Q7L4I2 434 aaKnown RBP10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 BHLHA9Q7RTU4 235 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 ARHGEF19Q8IW93 802 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 SIX6OS1Q8N1H7 587 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 DCLK2Q8N568 766 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 TERB1Q8NA31 727 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 RBBP8NLQ8NC74 664 aaPredicted RBP10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 SLC35F5Q8WV83 523 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 IRGQQ8WZA9 623 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 TFAP2BQ92481 460 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 KAT5Q92993 513 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 LOXL4Q96JB6 756 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 KREMEN1Q96MU8 473 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 IPO9Q96P70 1041 aaKnown RBP10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 XPO6Q96QU8 1125 aaKnown RBP10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 MED15Q96RN5 788 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 ULBP1Q9BZM6 244 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 CNGB3Q9NQW8 809 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 DEC1Q9P2X7 70 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 DACH1Q9UI36 760 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 NUDT5Q9UKK9 219 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 USP24Q9UPU5 2620 aa10.91□□□□□ -0.66
PTCD2P1-201ENST00000554393 SDK1Q7Z5N4 2213 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 RNF225M0QZC1 329 aaPredicted RBP10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 MDM4O15151 490 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 AXIN1O15169 862 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 FOXD2O60548 495 aaPredicted RBP10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 ERCC5P28715 1186 aaPredicted RBP10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 CHKAP35790 457 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 KDSRQ06136 332 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 ADIGQ0VDE8 80 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 MESP2Q0VG99 397 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 EFEMP1Q12805 493 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 SRSF5Q13243 272 aaKnown RBP10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 PUM1Q14671 1186 aaKnown RBP eCLIP10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 CRY1Q16526 586 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 ANO4Q32M45 955 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 C2orf27AQ580R0 203 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 CT47A1Q5JQC4 288 aaPredicted RBP10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 EOGTQ5NDL2 527 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 CEP68Q76N32 757 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 RRAGAQ7L523 313 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 CACNA2D4Q7Z3S7 1137 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 TRMT11Q7Z4G4 463 aaKnown RBP10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 C11orf74Q86VG3 221 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 RASSF3Q86WH2 238 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 MIB1Q86YT6 1006 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 FAM114A1Q8IWE2 563 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 KIAA2013Q8IYS2 634 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 IL17RCQ8NAC3 791 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 TSTD1Q8NFU3 115 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 UBA3Q8TBC4 463 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 PLD4Q96BZ4 506 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 ZC3H10Q96K80 434 aaKnown RBP10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 HSFY1Q96LI6 401 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 HHIPQ96QV1 700 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 KCNK17Q96T54 332 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 ZSWIM1Q9BR11 485 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 BBS2Q9BXC9 721 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 NUP62CLQ9H1M0 184 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 THAP9Q9H5L6 903 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 ABCC13Q9NSE7 274 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 MARCH2Q9P0N8 246 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 RASAL2Q9UJF2 1139 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 STARD13Q9Y3M8 1113 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 HBS1LQ9Y450 684 aaKnown RBP10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 NUP205Q92621 2012 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 ASPMQ8IZT6 3477 aa10.9□□□□□ -0.66
PTCD2P1-201ENST00000554393 THADAQ6YHU6 1953 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 TBC1D3BA6NDS4 549 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 NEDD8-MDP1E9PL57 170 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 M0QYV0 167 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 ALDH1A2O94788 518 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 FBXO21O94952 628 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 LATS1O95835 1130 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 PENKP01210 267 aaPredicted RBP10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 KLKB1P03952 638 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 TYRP14679 529 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 SDHBP21912 280 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 TGM1P22735 817 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 BRD2P25440 801 aaKnown RBP10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 CORO1AP31146 461 aaKnown RBP10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 HOXC13P31276 330 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 PXNP49023 591 aaPredicted RBP10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 RPL34P49207 117 aaKnown RBP10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 MFAP3P55082 362 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 SEC13P55735 322 aa10.89□□□□□ -0.67
PTCD2P1-201ENST00000554393 DAOAP59103 153 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms