RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 COG7P83436 770 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 AASDHQ4L235 1098 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 EGFLAMQ63HQ2 1017 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PM20D1Q6GTS8 502 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TCEAL6Q6IPX3 200 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TMEM270Q6UE05 265 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 RSRC2Q7L4I2 434 aaKnown RBP12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 BHLHA9Q7RTU4 235 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ARHGAP18Q8N392 663 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 FRMD1Q8N878 549 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 C12orf50Q8NA57 414 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 KCNV2Q8TDN2 545 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 RLN3Q8WXF3 142 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TFAP2BQ92481 460 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 KAT5Q92993 513 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TCEAL3Q969E4 200 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ERLEC1Q96DZ1 483 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 NT5C1BQ96P26 610 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CDK5RAP1Q96SZ6 601 aaKnown RBP12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ACOX2Q99424 681 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 POLMQ9NP87 494 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 VPS45Q9NRW7 570 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 MARCH2Q9P0N8 246 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 BCCIPQ9P287 314 aaKnown RBP eCLIP12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 HESX1Q9UBX0 185 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CIZ1Q9ULV3 898 aaPredicted RBP12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 STARD13Q9Y3M8 1113 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PCDHB4Q9Y5E5 795 aa12.47□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CACNA1BQ00975 2339 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CACNA1EQ15878 2313 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 SLC12A8A0AV02 714 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 BICDL2A1A5D9 508 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 BCLAF3A2AJT9 711 aaKnown RBP12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 RNF225M0QZC1 329 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 O00370 1275 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PMM2O15305 246 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CALCAP01258 141 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ADIGQ0VDE8 80 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 BST2Q10589 180 aaKnown RBP12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PMS2CLQ68D20 193 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 NUDT18Q6ZVK8 323 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 RRAGAQ7L523 313 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 TRMT11Q7Z4G4 463 aaKnown RBP12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 C11orf74Q86VG3 221 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 DENND1CQ8IV53 801 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PGBD3Q8N328 593 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 PPM1KQ8N3J5 372 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 LMO3Q8TAP4 145 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ZSWIM1Q9BR11 485 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 DCLK3Q9C098 648 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 LRRC4Q9HBW1 653 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 MBD1Q9UIS9 605 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 AGO1Q9UL18 857 aaKnown RBP12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 KIAA1257Q9ULG3 409 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 ZNF510Q9Y2H8 683 aa12.46□□□□□ -0.41
TRAPPC6B-204ENST00000554018 CKAP5Q14008 2032 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 A0A1W2PQF6 199 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 PCNX2A6NKB5 2137 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 YJEFN3A6XGL0 299 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 E7ENQ6 273 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 PIK3R2O00459 728 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 MAP3K13O43283 966 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 GABBR2O75899 941 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 CAVIN2O95810 425 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 PAEPP09466 180 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 HOXB2P14652 356 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 NTSR1P30989 418 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 P2RY2P41231 377 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 DHPSP49366 369 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 DGKGP49619 791 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 RGS7P49802 495 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 PAK1Q13153 545 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 MAP7D1Q3KQU3 841 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 PKDCCQ504Y2 493 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 STPG1Q5TH74 334 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 BSPRYQ5W0U4 402 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 FOXR2Q6PJQ5 311 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 LCLAT1Q6UWP7 414 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 FMNL3Q8IVF7 1028 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 ARHGEF19Q8IW93 802 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 SIX6OS1Q8N1H7 587 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 EHBP1Q8NDI1 1231 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 EDEM1Q92611 657 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 IPO9Q96P70 1041 aaKnown RBP12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 SRRTQ9BXP5 876 aaKnown RBP12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 FBXO10Q9UK96 956 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 STRIP2Q9ULQ0 834 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 AKAP13Q12802 2813 aa12.45□□□□□ -0.42
TRAPPC6B-204ENST00000554018 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.44□□□□□ -0.42
TRAPPC6B-204ENST00000554018 P4HA2O15460 535 aa12.44□□□□□ -0.42
TRAPPC6B-204ENST00000554018 PENKP01210 267 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC6B-204ENST00000554018 SETSIPP0DME0 302 aa12.44□□□□□ -0.42
TRAPPC6B-204ENST00000554018 LCP1P13796 627 aa12.44□□□□□ -0.42
TRAPPC6B-204ENST00000554018 GABRG2P18507 467 aa12.44□□□□□ -0.42
TRAPPC6B-204ENST00000554018 BRD2P25440 801 aaKnown RBP12.44□□□□□ -0.42
TRAPPC6B-204ENST00000554018 CHKAP35790 457 aa12.44□□□□□ -0.42
TRAPPC6B-204ENST00000554018 LIMK1P53667 647 aa12.44□□□□□ -0.42
TRAPPC6B-204ENST00000554018 CETN1Q12798 172 aa12.44□□□□□ -0.42
TRAPPC6B-204ENST00000554018 KCNH2Q12809 1159 aa12.44□□□□□ -0.42
TRAPPC6B-204ENST00000554018 CAMK4Q16566 473 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms