RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 FAM204AQ9H8W3 233 aa12.77□□□□□ -0.37
SHMT2-209ENST00000553949 GKN1Q9NS71 199 aa12.77□□□□□ -0.37
SHMT2-209ENST00000553949 CTTNBP2NLQ9P2B4 639 aa12.77□□□□□ -0.37
SHMT2-209ENST00000553949 UVRAGQ9P2Y5 699 aa12.77□□□□□ -0.37
SHMT2-209ENST00000553949 PRKAG3Q9UGI9 489 aa12.77□□□□□ -0.37
SHMT2-209ENST00000553949 TFR2Q9UP52 801 aa12.77□□□□□ -0.37
SHMT2-209ENST00000553949 UNC80Q8N2C7 3258 aa12.77□□□□□ -0.37
SHMT2-209ENST00000553949 DENND4AQ7Z401 1863 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 MYO16Q9Y6X6 1858 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 ZNF638Q14966 1978 aaKnown RBP12.76□□□□□ -0.37
SHMT2-209ENST00000553949 RCCD1A6NED2 376 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 LOC730098B7Z3J9 87 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 ANHXE9PGG2 379 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 M0QYT0 321 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 LEFTY2O00292 366 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 DPYSL4O14531 572 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 BMP1P13497 986 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 TFE3P19532 575 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-209ENST00000553949 GBP1P32455 592 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 PTPN9P43378 593 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 KPNA1P52294 538 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-209ENST00000553949 VAV2P52735 878 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 ZNF143P52747 638 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-209ENST00000553949 COG7P83436 770 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 OGDHQ02218 1023 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 ZP2Q05996 745 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 HTR4Q13639 388 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 OTUD1Q5VV17 481 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-209ENST00000553949 TANGO2Q6ICL3 276 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 PARM1Q6UWI2 310 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 MTSS1LQ765P7 747 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 KIAA1328Q86T90 577 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 ADHFE1Q8IWW8 467 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 CELF5Q8N6W0 485 aaKnown RBP12.76□□□□□ -0.37
SHMT2-209ENST00000553949 SLC35G2Q8TBE7 412 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 ZNF564Q8TBZ8 553 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-209ENST00000553949 ADAMTS19Q8TE59 1207 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 SH3RF2Q8TEC5 729 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 FNIP1Q8TF40 1166 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 RFFLQ8WZ73 363 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 FGF14Q92915 247 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 E2F7Q96AV8 911 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 ELSPBP1Q96BH3 223 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 SERPINB11Q96P15 392 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 TBCBQ99426 244 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 ADAM33Q9BZ11 813 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 TRIM7Q9C029 511 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 KIF9Q9HAQ2 790 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 ZFP14Q9HCL3 533 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 DDIT4Q9NX09 232 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 CALCOCO1Q9P1Z2 691 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 LIMD1Q9UGP4 676 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 HBS1LQ9Y450 684 aaKnown RBP12.76□□□□□ -0.37
SHMT2-209ENST00000553949 ADGRG1Q9Y653 693 aa12.76□□□□□ -0.37
SHMT2-209ENST00000553949 SYNJ2BP-COX16A0A087WUM0 186 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 HEPACAM2A8MVW5 462 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 IRAK2O43187 625 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 ECI2O75521 394 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 HMBSP08397 361 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 IRF1P10914 325 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 TCF3P15923 654 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 PSMA2P25787 234 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 TBX4P57082 545 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 ATP11AP98196 1134 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 ZNF252P-AS1Q0IIN9 211 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 NME3Q13232 169 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 NNTQ13423 1086 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 EIF4EBP2Q13542 120 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-209ENST00000553949 TCEAL1Q15170 157 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 TRIP4Q15650 581 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-209ENST00000553949 ZNF77Q15935 545 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 C15orf59Q2T9L4 293 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-209ENST00000553949 BNIPLQ7Z465 357 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 DDX42Q86XP3 938 aaKnown RBP eCLIP12.75□□□□□ -0.37
SHMT2-209ENST00000553949 RHOT2Q8IXI1 618 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 TXLNBQ8N3L3 684 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 TTC16Q8NEE8 873 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 RIN3Q8TB24 985 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 CENPIQ92674 756 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-209ENST00000553949 PLD4Q96BZ4 506 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 PGAP3Q96FM1 320 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-209ENST00000553949 SLC39A13Q96H72 371 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 LRRC3BQ96PB8 259 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 KXD1Q9BQD3 176 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 CNPY3Q9BT09 278 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 OSGEPQ9NPF4 335 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 OBP2AQ9NY56 170 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 COX16Q9P0S2 106 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 CFAP97Q9P2B7 532 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 ANAPC7Q9UJX3 599 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 TLR6Q9Y2C9 796 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 NUMBLQ9Y6R0 609 aa12.75□□□□□ -0.37
SHMT2-209ENST00000553949 OBSL1O75147 1896 aa12.74□□□□□ -0.37
SHMT2-209ENST00000553949 A0A0A6YYK5 440 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-209ENST00000553949 MYO1FO00160 1098 aa12.74□□□□□ -0.37
SHMT2-209ENST00000553949 PJA2O43164 708 aa12.74□□□□□ -0.37
SHMT2-209ENST00000553949 CCP110O43303 1012 aa12.74□□□□□ -0.37
SHMT2-209ENST00000553949 STC2O76061 302 aa12.74□□□□□ -0.37
SHMT2-209ENST00000553949 MTA2O94776 668 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms