RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 NFKBIZQ9BYH8 718 aa12.7□□□□□ -0.38
SHMT2-207ENST00000553837 VPS11Q9H270 941 aa12.7□□□□□ -0.38
SHMT2-207ENST00000553837 MROH8Q9H579 483 aa12.7□□□□□ -0.38
SHMT2-207ENST00000553837 STRIP2Q9ULQ0 834 aa12.7□□□□□ -0.38
SHMT2-207ENST00000553837 ZSWIM8A7E2V4 1837 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-207ENST00000553837 SGK1O00141 431 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 OPHN1O60890 802 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 ETS2P15036 469 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 VAV1P15498 845 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 AMPD1P23109 780 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 SERPINB3P29508 390 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 GPD2P43304 727 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 PHEXP78562 749 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 PLCB3Q01970 1234 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 OVGP1Q12889 678 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 ITGA9Q13797 1035 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 HNRNPDQ14103 355 aaKnown RBP12.69□□□□□ -0.38
SHMT2-207ENST00000553837 FAM187BQ17R55 369 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 TRMT5Q32P41 509 aaKnown RBP12.69□□□□□ -0.38
SHMT2-207ENST00000553837 MSS51Q4VC12 460 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 LRRC43Q8N309 656 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.69□□□□□ -0.38
SHMT2-207ENST00000553837 AFG1LQ8WV93 481 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 TMEM176AQ96HP8 235 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 FAM161BQ96MY7 647 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 WDR83Q9BRX9 315 aaKnown RBP12.69□□□□□ -0.38
SHMT2-207ENST00000553837 ADAM33Q9BZ11 813 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 PSMC3IPQ9P2W1 217 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-207ENST00000553837 FARP1Q9Y4F1 1045 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-207ENST00000553837 A0A1W2PPM1 405 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 TCRBV7S3A2A0A539 114 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 TM9SF1O15321 606 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 MED7O43513 233 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 ATP9BO43861 1147 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 PIAS1O75925 651 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 MCF2P10911 925 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 KRT4P19013 534 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 OSBPP22059 807 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 MIPP30301 263 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 PHKA2P46019 1235 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 MTM1Q13496 603 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 TMEM259Q4ZIN3 620 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 ZNF484Q5JVG2 852 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 MFSD4BQ5TF39 518 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 FAM91A1Q658Y4 838 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 CYP4V2Q6ZWL3 525 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-207ENST00000553837 DPH6Q7L8W6 267 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 UNC45BQ8IWX7 931 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 FNIP1Q8TF40 1166 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 MCRS1Q96EZ8 462 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 C16orf70Q9BSU1 422 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 MAK16Q9BXY0 300 aaKnown RBP12.69□□□□□ -0.38
SHMT2-207ENST00000553837 PCDH9Q9HC56 1237 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 TRPV5Q9NQA5 729 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 UTP6Q9NYH9 597 aaKnown RBP12.69□□□□□ -0.38
SHMT2-207ENST00000553837 TUBGCP4Q9UGJ1 667 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 AKT3Q9Y243 479 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 TMEM98Q9Y2Y6 226 aa12.69□□□□□ -0.38
SHMT2-207ENST00000553837 WDR91A4D1P6 747 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 M0QYV0 167 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 ALOX15BO15296 676 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 RNASEH1O60930 286 aaKnown RBP12.68□□□□□ -0.38
SHMT2-207ENST00000553837 PFKMP08237 780 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 PIM1P11309 404 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-207ENST00000553837 CCNFP41002 786 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 ADCYAP1R1P41586 468 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 GABRB2P47870 512 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 GPX6P59796 221 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 MMRN1Q13201 1228 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 MORF4L2Q15014 288 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 ZNF792Q3KQV3 632 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 FNBP1LQ5T0N5 605 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 BBS12Q6ZW61 710 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 IFNLR1Q8IU57 520 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-207ENST00000553837 ANKMY2Q8IV38 441 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 SCUBE1Q8IWY4 988 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 ZBED8Q8IZ13 594 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 PIP4K2CQ8TBX8 421 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 CPT1BQ92523 772 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 HPDLQ96IR7 371 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 TSSK1BQ9BXA7 367 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 TMEM120AQ9BXJ8 343 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 EPB41L1Q9H4G0 881 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 VPS37BQ9H9H4 285 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 GPAMQ9HCL2 828 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 ETNK2Q9NVF9 386 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 CLUHO75153 1309 aa12.68□□□□□ -0.38
SHMT2-207ENST00000553837 B2RBV5 119 aa12.67□□□□□ -0.38
SHMT2-207ENST00000553837 FKBP6O75344 327 aa12.67□□□□□ -0.38
SHMT2-207ENST00000553837 BAG2O95816 211 aa12.67□□□□□ -0.38
SHMT2-207ENST00000553837 TRUB2O95900 331 aaKnown RBP12.67□□□□□ -0.38
SHMT2-207ENST00000553837 ITGA2BP08514 1039 aa12.67□□□□□ -0.38
SHMT2-207ENST00000553837 ADRA1DP25100 572 aa12.67□□□□□ -0.38
SHMT2-207ENST00000553837 RPL22P35268 128 aaKnown RBP12.67□□□□□ -0.38
SHMT2-207ENST00000553837 ACTR3P61158 418 aa12.67□□□□□ -0.38
SHMT2-207ENST00000553837 CDC16Q13042 620 aa12.67□□□□□ -0.38
SHMT2-207ENST00000553837 PDIA2Q13087 525 aaKnown RBP12.67□□□□□ -0.38
SHMT2-207ENST00000553837 MED21Q13503 144 aa12.67□□□□□ -0.38
SHMT2-207ENST00000553837 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms